Gene Bcen_6322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6322 
Symbol 
ID4096965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp936136 
End bp937326 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content69% 
IMG OID638019611 
Product2-nitropropane dioxygenase, NPD 
Protein accessionYP_626158 
Protein GI107029063 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTAC GCACTTCCTT TCCGCCGCTG ACGATCCGCG GCCGCACCTT GCTGCCAGTC 
GTGCAGGGCG GCATGGGCGT CGGCATCTCC GCGCACCGGC TGGCGGGCAG CGTCGCGCGC
GAAGGCGCGG TCGGCACGAT CGCGAGCATC GACCTGCGCC ACCATCATGC GGACCTGCTC
GCGCGGTGTC GCGCGCAACC CGATCGCGCG ACGCTCGAGG CGGCGAACCT CGACGCGCTC
GCGCGCGAGA TCCGTCTCGC GAAAACGTAC AGCGAAGGGC GCGGGATGAT CGCGGTCAAC
GTGATGAAGG CGGTGAGCGC GCAGGCGGAC TACGTGCGGG TCGCGTGCGA CGAGGGCGCG
GATGCGATCG TGATGGGCGC GGGCCTGCCG CTCGATCTGC CCGACCTCAC GCAAGGGCAC
GACGTCGCGC TGATCCCGAT CCTGTCGGAC AGCCGCGGGA TCGCGCTGGT GCTGAAGAAG
TGGATGAAGA AGGGGCGCCT GCCCGATGCG ATCGTGATCG AGCATCCGGC GCACGCGGGC
GGGCACCTCG GCGTCACGCA GATCGACGAC ATGCACGACG CCCGCTTCGA TTTCGCACGC
GTGCTGGACG AGGCCGCGCA GGTGATGGCA TCGCTCGGCA TCGCTCGCGA CACGATCCCG
TTGATCGTGG CCGGCGGGAT CAACAGTCAC GACACGGTGC GCGCGGCGTT CGCGGCCGGC
GCGAATGGCG TGCAGGTCGG GACGCCGTTC GCGGTGACCG AAGAGGGCGA CGCGCATCCG
CACTTCAAGC GCGTGCTCGC CGATGCGACG CCGGACGACA TCGTCGAATT CGTCAGCGTG
ACGGGCCTGC CCGCGCGAGC GGTGAAGACG CCGTGGCTCG ATCGTTACCT GCGCAACGAG
ACGCGCATTC GCAACAAGCT CGGCGCGTTC AAGCAGCGCT GCCCGACCGC GCTCGAATGC
CTGAGCGTAT GCGGGCTGCG CGACGGCATC GAGAAGTTCG ACCACTTCTG CATCGACACG
CGGCTCGCGG CCGCGCTGCG CGGCGACGTC GCGAACGGGC TGTTCTTCCG CGGCCGCGAA
GCCTTGCCGT TCGGCCGTGC GATCCGCAGC GTGCGCGATC TGCTCGACCT GCTGCTGACG
GGCAGTGCGA CCGAGCCTGC GGCAAACCGT CCCACGTTTA CGCTGGCTTG A
 
Protein sequence
MTVRTSFPPL TIRGRTLLPV VQGGMGVGIS AHRLAGSVAR EGAVGTIASI DLRHHHADLL 
ARCRAQPDRA TLEAANLDAL AREIRLAKTY SEGRGMIAVN VMKAVSAQAD YVRVACDEGA
DAIVMGAGLP LDLPDLTQGH DVALIPILSD SRGIALVLKK WMKKGRLPDA IVIEHPAHAG
GHLGVTQIDD MHDARFDFAR VLDEAAQVMA SLGIARDTIP LIVAGGINSH DTVRAAFAAG
ANGVQVGTPF AVTEEGDAHP HFKRVLADAT PDDIVEFVSV TGLPARAVKT PWLDRYLRNE
TRIRNKLGAF KQRCPTALEC LSVCGLRDGI EKFDHFCIDT RLAAALRGDV ANGLFFRGRE
ALPFGRAIRS VRDLLDLLLT GSATEPAANR PTFTLA