Gene Bcen_6288 details

Gene Information

• Locus tag: Bcen_6288
• ID: 4096719
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008062
• Strand: +
• Start bp: 901919
• End bp: 903784
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 638019577
• Product: Poly(R)-hydroxyalkanoic acid synthase, class I
• Protein accession: YP_626124
• Protein GI: 107029029
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG3243] Poly(3-hydroxyalkanoate) synthetase
• TIGRFAM ID: [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGCAT CGAAAAATTC GTCGACGTCC GCGCATGCGG GCACTTCCGC GGGCAGCACC 
GGTTTCGATC CGGCCGCCCA GCCGATGCAG CAGATGTTCG AGTCGTGGTT GAACGCGTGG 
CGTGGTTTTG CCGATCCGGC GCGTGCCGCG ACGGCCTCGG CCACCGTCAA TCCGTTCGCG 
ACATTCCAGT TCCCGACATC GTTTCCGTTC CAGCTGCCGT CGATGCCCGA CCTCGGTGCG 
ATGGCGTCGC CGTTCGCGGG GCTGAAGCTG CCAGTTGCGG CGATTCCGCC CGAACGGCTC 
CAGGCATTGC AGGCCGACTA CGCGCGCGAT TGCATGACGC TGATGCAGCA GGCGGCCGCC 
GCGAAGCTCG AGTCGCCGGA GTTGAAAGAC CGCCGCTTCA GCGGCGACGC ATGGAAGGCG 
TCGCCCGCGC ATGCGTTCGC GGCTGCGTGG TATCTGCTCA ACGCGCGTTA TCTGCAGGAG 
CTGGCCGACG CGTTGCAGAC CGATCCGAAG ACGCGCGAGC GCATTCGTTT CACGGTCCAG 
CAATGGACGG CCGCCGCCGC GCCGAGCAAC TTCCTCGCAC TCAATCCCGA TGCACAGAAA 
TCGATCCTCG AGACGCAGGG CGAAAGCCTG CGGCAGGGGA TGATGAACCT GCTCGGCGAC 
CTGCAGCGCG GCAAGATTTC GCAGACCGAC GAATCGCAGT TCGTGGTCGG CAAGAACCTC 
GGGTGTACCG CGGGCGCGGT CGTGTACGAG AACGACCTGA TCCAGCTGAT CCAGTACACG 
CCGAAGACGG ACAAGGTGTT CGAGCGGCCG CTGCTGATCG TGCCGCCGTG CATCAACAAG 
TTCTACATCC TCGACCTGCA ACCCGAGAAT TCGCTCGTCG CGCACGCGCT GTCGAACGGC 
CATCAGGTGT TCCTCGTGTC GTGGCGCAAC GCGGATGCGT CGGTCGCGCA CAAGACGTGG 
GACGACTACA TGAACGAAGG GCTGCTCGCG GCGATCGACG CGGTGCAGCA GATCAGCGGC 
CGCGAGCAGA TCAACACGCT CGGCTTCTGC GTCGGCGGCA CGATGCTCGC GACCGCGCTC 
GCGGTGCTCG CCGCCCGCGG CGAACATCCG GCTGCGTCGA TGACATTGCT CACCGCGATG 
CTCGATTTCA CCGACACGGG CATCCTCGAC GTGTTCGTCG ACGAAGCGCA CGTGCAGATG 
CGCGAGCAGA CCATCGGCGG CAAGAACGGT ACGCAACCGG GGCTGATGCG CGGCATGGAG 
TTCGCGAACA CGTTCTCGTT CCTGCGGCCG AACGATCTGG TGTGGAACTA TGTCGTCGAC 
AACTACCTGA AGGGCCGCAC GCCCGCGCCG TTCGACCTGC TGTACTGGAA CAGCGATTCG 
ACGAGCCTGC CGGGCCCGAT GTACGCGTGG TACCTGCGCC ATACCTATCT CGAAAACAAG 
CTGCGCGAAC CGGGCGCGTT GACCGTGTGC GGCGAATCGG TCGACCTGTC GCTGATCGAC 
GTGCCGACCT TCATCTACGG GTCGCGCGAG GATCACATCG TGCCGTGGCA GACCGCCTAC 
GCATCGACGT CGATCCTGTC GGGTCCGCTG AAATTCGTGC TCGGCGCGTC GGGGCACATC 
GCGGGCGTGA TCAATCCGCC GGCGAAGAAG AAGCGCAGCT ACTGGGTCAA CGAGGGCGAC 
CTGCCCGAAT CCGCGGACGA CTGGTTTGCC GGGGCGACCG AGCAGCCGGG AAGCTGGTGG 
ACGACGTGGG TCGAGTGGCT CGACGCATAC GGCGGCCGCA AGGTCGTGCC GCCGTCCCAG 
CCGGGTTCCA CGCAATTCCC GGTGATCGAG CCGGCACCCG GGCGCTACGT GTTGCAGCGC 
GATTGA 

 

Protein sequence

MTASKNSSTS AHAGTSAGST GFDPAAQPMQ QMFESWLNAW RGFADPARAA TASATVNPFA 
TFQFPTSFPF QLPSMPDLGA MASPFAGLKL PVAAIPPERL QALQADYARD CMTLMQQAAA 
AKLESPELKD RRFSGDAWKA SPAHAFAAAW YLLNARYLQE LADALQTDPK TRERIRFTVQ 
QWTAAAAPSN FLALNPDAQK SILETQGESL RQGMMNLLGD LQRGKISQTD ESQFVVGKNL 
GCTAGAVVYE NDLIQLIQYT PKTDKVFERP LLIVPPCINK FYILDLQPEN SLVAHALSNG 
HQVFLVSWRN ADASVAHKTW DDYMNEGLLA AIDAVQQISG REQINTLGFC VGGTMLATAL 
AVLAARGEHP AASMTLLTAM LDFTDTGILD VFVDEAHVQM REQTIGGKNG TQPGLMRGME 
FANTFSFLRP NDLVWNYVVD NYLKGRTPAP FDLLYWNSDS TSLPGPMYAW YLRHTYLENK 
LREPGALTVC GESVDLSLID VPTFIYGSRE DHIVPWQTAY ASTSILSGPL KFVLGASGHI 
AGVINPPAKK KRSYWVNEGD LPESADDWFA GATEQPGSWW TTWVEWLDAY GGRKVVPPSQ 
PGSTQFPVIE PAPGRYVLQR D