| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_6213 |
|---|
| Symbol | |
|---|
| ID | 4096971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | - |
|---|
| Start bp | 818099 |
|---|
| End bp | 819190 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638019503 |
|---|
| Product | NLP/P60 |
|---|
| Protein accession | YP_626050 |
|---|
| Protein GI | 107028955 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.935456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGAA TCTGGGTTCC CGTCGCCGTC GTCTCCCTGC TTGCGGCCTG TTCCAGCGTG
CCGCCGCAGT CGGCATCGCG TTCCGCTTCG GGGATGAAGA TCACGACGCC GCGCGCATTC
CCCGCGCCCG CCAATTTCCC GAAATTCGTC GACCACAGCG TCGGCCAGGA AGAAATCTCG
ATCCAGGCGA TGAGCCTCGT CGGCGTCCCG TATCGCTGGG GCGGCAACAC GCCGACGAGC
GGCTTCGACT GCAGCGGGCT CGTGCGCTAC GTGATCGGCC GCGCGGCCGA CGTGAACCTG
CCGCGCACGA CTGCCGACAT GAGCGGCCGC GGCGTATCGG TCGAACCCGA CGAGATCGCG
CCGGGCGACC TGATTTTCTT CAATACGACC GGACGGCCGC ATTCGCACGT CGGCATCTAT
GTCGGCAAGC TGCGCTTCGT CAACGCGCCG TCGACGGGCG GCACCGTACG GCTCGACTAC
CTGACGAACC CGTACTGGGC CAAGCGATTC GACGGCATTC GCCGCGTCGC GCCGCCGCGC
TCGGCCCCGA CGCCGTTCGA TGCGCCGACT TACGAGGCCA AGCGTGACGA GCCGCGTAAT
CCGCCGGTGG TCGCGGCCGC TCCGGTGGTC GTGACGGCTG CCGTCGCACA GCGGCAGCCC
GCGTATGCGT CGTCGCAAGC AAGAGCAACG CAGACACAGG CACCGGCCAT CCCGAGCACG
CCGGTCGTGA CGGCCGCCGC AGCTGCACCG GCAGCACCGG CCGCCGATCC GTATGAACCG
CCGCCACCGA GGATGCAGGC GGCCCAGCAG CAAGCCACGT CGGTGAATGA CGGCGCAACC
GCGATGGCGG CCAATGCAGG ACCGGCCGCG TCGGCGGAGG TCGGCACGCA GATTCCGACG
ACCGCGCTGA CGGCCGCCCA GGCTGCCGCC TTCGATGCAG AGCCGCCGCC CGCCACCGCG
TCGACGCCGG CACGCAGTAT CGAGCCCGCG CCCGTGCAGG TATTGCGTGC GTCGACGCAA
TCTGCACCCG TCAGCCCGCG CACGAGTACG GCGGACGATC CGATAGCACG GTTTGCGACC
GGCAGTTACT GA
|
|---|
| Protein sequence | MLRIWVPVAV VSLLAACSSV PPQSASRSAS GMKITTPRAF PAPANFPKFV DHSVGQEEIS
IQAMSLVGVP YRWGGNTPTS GFDCSGLVRY VIGRAADVNL PRTTADMSGR GVSVEPDEIA
PGDLIFFNTT GRPHSHVGIY VGKLRFVNAP STGGTVRLDY LTNPYWAKRF DGIRRVAPPR
SAPTPFDAPT YEAKRDEPRN PPVVAAAPVV VTAAVAQRQP AYASSQARAT QTQAPAIPST
PVVTAAAAAP AAPAADPYEP PPPRMQAAQQ QATSVNDGAT AMAANAGPAA SAEVGTQIPT
TALTAAQAAA FDAEPPPATA STPARSIEPA PVQVLRASTQ SAPVSPRTST ADDPIARFAT
GSY
|
|---|
| |