Gene Bcen_6178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6178 
Symbol 
ID4096532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp785923 
End bp787401 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content63% 
IMG OID638019468 
Productdiguanylate cyclase 
Protein accessionYP_626015 
Protein GI107028920 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.837587 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCCCC GTCGGACTGC CCCTTACGTC ATCGTGGCAA TTGCTTCCAT GATCGCGTGC 
GCGCTCATGG CGCTATGCGT GCTGCAACTC TTGCAGAGCC GCGACGACGC GATGGAGCGT
GCAAGGGAAA CGTCACGCAA CCTCGGACTT GTCGCCGAGC GCGACATCGA ACGCAATTTC
GAGTTGTACG ACCTGTCTTT GCAGGCCGTC ATCCATGGGT TGCAGCGCCG CGATGTGATG
GACGCTTCGC CCAGCTTGCG CCGTGCCGTG CTGTTCGATC ACGCGATGAC CGCGGAATTT
CTCGGTTCGA TGCTCGTGAT GGATGCAGGC GGCAATATCG TCCTGGATTC GGGCTATGAC
GAGCCGCGCA AGGGCAATTT CGCCGATCGC CGATACTTCA CGATCCACCG CGACAATCCG
AACGTCGGAC TCTATGTCAG TGACCCATTC GTATCCCGTT TGCGGGGAGG CATGCTCAGT
ATCGCGCTTA CGCGGCGGAT TTCGAACCCC GATGGATCGT TTGGCGGCAT TGCCGTTATT
GCGGTCAATC TTGAATATTT TCATCAGCTC TTCGCCGGGC TTTCGCTTGG CAAACATGGC
TCGATTTCGC TGATCGGCGA AGACGGCAAG ATGGTGATGC GTCAGCCGTA CGATGTGCAT
ACCATCGGCC GCGACCTCAG CAAGGCCGCA ACGTTCCGGC GTTTCCAGAC CGCGCGAGAG
GGCTCCTTCT CTGAAACCTC GTCGATCGAC GGCGTGCGCC GCCTCTACTA CTTCAAGCAT
TTGCCGAAAC TGCCGCTGAT CATCATGGTC GCGGAGGCCG AGCAGGACAT TTACGCCGCC
TGGCGGCAAC GTGCGATCAC GATCGGCGGA CTGGTCGCGA CGTTCGGGGT GGCGTTCATC
GCGCTGTCGC TGCTGCTCGG TTCGCAGCTG CGGCGCCGTA TGCGAGCCGA GTCGGAACTC
GTGCTGCTCG CCCGGACGGA CGGTCTCACC GGCCTGAGCA ATCGCCGCAG CTTTGGCGAG
GTACTGGACA ACGAGTGGCG TCGCGCCCGG CGTGCGCGTT CCGTTTTCTC GCTGCTGTTC
GTGGATGTGG ACCGGTTCAA GGCTTACAAC GACACGTACG GTCATCAGGC CGGGGACGAT
GCGTTGGCGG CGGTCGCGCG GTGCATCGGC GAGAACATTC GCCGGCCGGC CGATACGGCG
GCTCGTTATG GCGGGGAGGA GTTCGTCGTG TTGCTCCCCG ACACGTCGCA AACCGGCGCG
GCGCAGATCG CCGAGCGGAT TCGTGCGGCC ATCGACGAGT TGGCCCTCGA GCACGCTGGC
AGCGAATACG GGCGTGTTAC CGCGAGCATT GGCCTGGCGA GCTGGACGCC CGATCAGGAA
GGGCAGCCTG ATGCCGTGAT CAAGGCGGCT GATGAGGCGC TGTACTACGC GAAGGCGACT
GGTCGGAACA AGGTCGCCGC GTTGCAGCCG GCGGAGTGA
 
Protein sequence
MHPRRTAPYV IVAIASMIAC ALMALCVLQL LQSRDDAMER ARETSRNLGL VAERDIERNF 
ELYDLSLQAV IHGLQRRDVM DASPSLRRAV LFDHAMTAEF LGSMLVMDAG GNIVLDSGYD
EPRKGNFADR RYFTIHRDNP NVGLYVSDPF VSRLRGGMLS IALTRRISNP DGSFGGIAVI
AVNLEYFHQL FAGLSLGKHG SISLIGEDGK MVMRQPYDVH TIGRDLSKAA TFRRFQTARE
GSFSETSSID GVRRLYYFKH LPKLPLIIMV AEAEQDIYAA WRQRAITIGG LVATFGVAFI
ALSLLLGSQL RRRMRAESEL VLLARTDGLT GLSNRRSFGE VLDNEWRRAR RARSVFSLLF
VDVDRFKAYN DTYGHQAGDD ALAAVARCIG ENIRRPADTA ARYGGEEFVV LLPDTSQTGA
AQIAERIRAA IDELALEHAG SEYGRVTASI GLASWTPDQE GQPDAVIKAA DEALYYAKAT
GRNKVAALQP AE