| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_6134 |
|---|
| Symbol | |
|---|
| ID | 4097167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | - |
|---|
| Start bp | 727685 |
|---|
| End bp | 728905 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638019421 |
|---|
| Product | acetylornithine deacetylase |
|---|
| Protein accession | YP_625971 |
|---|
| Protein GI | 107028876 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.131137 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACTC TCGACGCGAC GGCGCCGTCC GCCGCAACCG AAGGCGATGC ATCGCTCGTC
AGCCTGCCCT GGGTCAAGCA ACTCGTGTCG ATGGACACGA CGAGCCGCGT GCCGAACCTC
GGCCTGATCG AAACGGTACG CGACGCGCTC GCCGCGAAGG GCATCGCGTC GACGATCACG
CACGATCCGC GTGAAGGCTG GGCGAACCTG TTTGCCACCG TGCCCGCGCA CGACGGTTCG
ACGAACGGCG GCATCGTGCT GTCGGGCCAC ACCGACGTCG TGCCGGTCGA CGGCCAGCAA
TGGGACAGCA ACCCGTTCGC GCCGGAAATC CGCGACGGCC GCCTGTACGG CCGCGGCACC
TGCGACATGA AGGGCTTCAT CGGCGCGGCG CTCGCGCTGC TGCCCGAGAT GCAGGCGACG
AAGCTCGCGA AGCCGATCCA TTTCGCGCTG TCCTACGACG AGGAAATCGG CTGCGCGGGC
GCGCCGCTGA TGATCGCCGA TCTCGTGAAG CGCGGCGTGC AGCCGTCCGG CTGCATCGTC
GGCGAGCCGA CCAGCATGCG GCCGATCATC GCGCACAAGG GCATCAACGC GTACCGCTGC
TGCGTGCGCG GCCACGCCGC ACATTCGTCG CTGACGCCGA AGGGGCTCAA CGCGATCGAG
TATGCGGCGC GCCTGATCTG CCACATCCGC GACATCGCTG AGCGCTTCCG TGCCGAAGGC
CCGTTCGACG AACTGTACGA CGTGCCGTTC ACCACCGCGC AGACGAGCAC GATCCAGGGC
GGCAACGCGA TCAACACGGT GCCGGCCGAG TGCCGCTTCG ACTTCGAATT CCGCAACCTG
CCGACGCTCG ATCCCGAGCA GATCTTCACG CGCATCGAAG CGTATGCGCA GGAAACGCTG
CTGCCGCAGA TGCTGCGCGA ACATCCGAAC GCCGCGATCG AATTCTCGAA GATCGCCGCG
GCGCCCGGCC TCGACGCGAC CGAGCAAGCC GCGATCACGC AGCTCGTGCG CGCGCTGACG
GCCGACCAGG ACAAGCGCAA GGTCGCGTAC GGCACCGAGG CCGGGCTGTT CGCCCGCGCG
GGCATTCCGA GCGTCGTGTG CGGGCCCGGC AACATCGAGC AGGCGCACAA GCCGAACGAA
TATGTCGAGC TCGCGCAGCT CGCCGGCTGC GAGCAGTTCC TGCGCAAGTT CATTCGCAGC
ATGTCGGTCG ACCCGCACTG A
|
|---|
| Protein sequence | MSTLDATAPS AATEGDASLV SLPWVKQLVS MDTTSRVPNL GLIETVRDAL AAKGIASTIT
HDPREGWANL FATVPAHDGS TNGGIVLSGH TDVVPVDGQQ WDSNPFAPEI RDGRLYGRGT
CDMKGFIGAA LALLPEMQAT KLAKPIHFAL SYDEEIGCAG APLMIADLVK RGVQPSGCIV
GEPTSMRPII AHKGINAYRC CVRGHAAHSS LTPKGLNAIE YAARLICHIR DIAERFRAEG
PFDELYDVPF TTAQTSTIQG GNAINTVPAE CRFDFEFRNL PTLDPEQIFT RIEAYAQETL
LPQMLREHPN AAIEFSKIAA APGLDATEQA AITQLVRALT ADQDKRKVAY GTEAGLFARA
GIPSVVCGPG NIEQAHKPNE YVELAQLAGC EQFLRKFIRS MSVDPH
|
|---|
| |