Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_6047 |
Symbol | dapD |
ID | 4097098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 637252 |
End bp | 638079 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638019335 |
Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
Protein accession | YP_625885 |
Protein GI | 107028790 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.336022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGCAAC AACTTCAGCA AATCATCGAT ACCGCCTGGG AAAACCGCGC CGAGCTGTCG CCGAAGGCCG CGCCCGCGGA CGTCCGCGAA GCCGTCGCTC ACGCGATCGA GCAACTCGAC AAGGGTGCAC TGCGCGTCGC CGAGAAAATC GACGGCAACT GGACGGTCCA CCAGTGGCTG AAGAAGGCCG TGCTGCTGTC GTTCCGCCTG GAGGACAACG CGCCGATGCC GGCCGGCGGC TACTCGCAGT TCTACGACAA GGTGCCGTCG AAGTTCGCGA ACTACACGGC CGAAGACTTC GCCGCGGGCG GCTTCCGCGT CGTCCCGCCG GCCATCGCGC GCCGCGGCTC GTTCATCGCG AAGAACGTCG TGCTGATGCC GTCGTACACC AACATCGGCG CGTACGTCGA CGAAGGCACG ATGGTCGACA CGTGGGCCAC GGTCGGTTCG TGCGCGCAGA TCGGCAAGAA CGTGCACCTG TCGGGCGGCG TCGGTATCGG CGGCGTGCTC GAGCCGCTGC AGGCGAATCC GGTCATCATC GAAGACAACT GCTTCATCGG CGCGCGCTCG GAAGTCGTCG AAGGCGTGAT CGTCGAGGAA AACTCGGTGA TCTCGATGGG CGTGTACCTC GGCCAGAGCA CGAAGATCTA CGATCGCGAG ACGGGCGAAG TCAGCTACGG CCGCATCCCG GCCGGCTCGG TCGTCGTCGC CGGCAACCTG CCGTCGAAGG ACGGTTCGCA CAGCCTGTAC TGCGCGGTGA TCGTCAAGAA GGTCGACGCG AAGACGCGTG CGAAGGTCGG CCTGAACGAG CTGCTGCGAG GCGACTGA
|
Protein sequence | MSQQLQQIID TAWENRAELS PKAAPADVRE AVAHAIEQLD KGALRVAEKI DGNWTVHQWL KKAVLLSFRL EDNAPMPAGG YSQFYDKVPS KFANYTAEDF AAGGFRVVPP AIARRGSFIA KNVVLMPSYT NIGAYVDEGT MVDTWATVGS CAQIGKNVHL SGGVGIGGVL EPLQANPVII EDNCFIGARS EVVEGVIVEE NSVISMGVYL GQSTKIYDRE TGEVSYGRIP AGSVVVAGNL PSKDGSHSLY CAVIVKKVDA KTRAKVGLNE LLRGD
|
| |