Gene Bcen_6039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6039 
Symbol 
ID4097090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp628564 
End bp629940 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content69% 
IMG OID638019327 
ProductDNA repair protein RadA 
Protein accessionYP_625877 
Protein GI107028782 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1066] Predicted ATP-dependent serine protease 
TIGRFAM ID[TIGR00416] DNA repair protein RadA 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.667951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCAAAC AGAAAACCGT TTACGTCTGC AGCGAGTGCG GCGGACAGAC CCCGAAGTGG 
CAGGGCCAGT GCCCGTCGTG CCAAGCCTGG AACACGCTCG TCGAATCGGT CGCCGAGTCG
CCGGCCGCCC ATCGGTTCCA GTCGCTCGCG AAGCGGGCGC CGGTGCAGCG GCTCGCCGAC
ATCGAGGCCG CCGACGTGCC GCGCTTCTCC ACCGGCATCG GCGAATTCGA CCGCGTGCTG
GGCGGCGGGC TGGTGCCCGG CGGTGTCGTG CTGATCGGCG GCGATCCGGG CATCGGCAAG
TCGACGCTGC TGCTGCAGTC GCTCGCGGAT ATCGCGAACG AGAGGCGCGC CCTCTATATC
AGCGGCGAGG AATCGGCCGC GCAGATCGCG TTGCGCGCGC AACGGCTCGC GTTGCTCGAC
GGCGGTGCGC CGGCGGCCGA ACTGAAGCTG CTCGCCGAGA TCCAGCTCGA GAAGATCCAG
GCCGCGATCG ATTCGGAGCG GTCGGACGTG GCCGTCATCG ACTCGATCCA GACCGTCTAT
TCCGAGGCGC TGACGTCGGC GCCGGGCTCG GTCGCGCAGG TGCGCGAGTG CGCGGCGCAG
CTCACGCGCA TCGCGAAACA GTCGGGCACC GCGATCATCA TGGTCGGGCA CGTGACGAAG
GAGGGCAATC TGGCCGGCCC GCGCGTGCTC GAGCACATCG TCGACACGGT GCTGTATTTC
GAAGGCGACA CGCATTCGTC GTTCCGGCTC GTGCGCGCGT TCAAGAACCG TTTCGGCGCG
GTCAACGAGC TCGGCGTGTT CGCAATGACC GAGCGCGGGC TGCGCGGCGT GGCCAACCCG
TCCGCGCTGT TCCTGTCGCA GCACGAGCAG GTCGTGCCCG GTTCGTGCGT GCTCGTCACG
CAGGAAGGCA CGCGCCCGCT GCTCGTCGAA ATCCAGGCGC TCGTCGATAC GGCGCACGTG
CCGAACCCGC GCCGGCTCGC GGTCGGCCTC GAGCAGAACC GGCTCGCGAT GCTGCTCGCG
GTGCTGCACC GCCACGCGGG CATCGCAGCC TTCGACCAGG ACGTGTTCCT CAATGCGGTG
GGCGGCGTGA AGATCACCGA GCCGGCCGCC GACCTCGCGG TGCTGCTCGC GATTCACTCG
TCGATGCGCA ACAAGGCGCT GCCGAAAGGG CTGATCGTGT TCGGCGAGGT GGGGCTGGCG
GGCGAGATCC GGCCGTCCCC GCGCGGGCAG GAACGGCTGC GCGAAGCGGC GAAGCTCGGT
TTCACGTCCG CGCTGATTCC GAAGGCGAAT GCGCCGAAAC AGCCGATCGA AGGGCTGAAC
GTGATGGCCG TCGAGCGGCT CGAGCAGGCG ATCGACCGCG TGCGCGATCT CGAATGA
 
Protein sequence
MAKQKTVYVC SECGGQTPKW QGQCPSCQAW NTLVESVAES PAAHRFQSLA KRAPVQRLAD 
IEAADVPRFS TGIGEFDRVL GGGLVPGGVV LIGGDPGIGK STLLLQSLAD IANERRALYI
SGEESAAQIA LRAQRLALLD GGAPAAELKL LAEIQLEKIQ AAIDSERSDV AVIDSIQTVY
SEALTSAPGS VAQVRECAAQ LTRIAKQSGT AIIMVGHVTK EGNLAGPRVL EHIVDTVLYF
EGDTHSSFRL VRAFKNRFGA VNELGVFAMT ERGLRGVANP SALFLSQHEQ VVPGSCVLVT
QEGTRPLLVE IQALVDTAHV PNPRRLAVGL EQNRLAMLLA VLHRHAGIAA FDQDVFLNAV
GGVKITEPAA DLAVLLAIHS SMRNKALPKG LIVFGEVGLA GEIRPSPRGQ ERLREAAKLG
FTSALIPKAN APKQPIEGLN VMAVERLEQA IDRVRDLE