Gene Bcen_5979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5979 
Symbol 
ID4096602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand+ 
Start bp561419 
End bp562081 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content67% 
IMG OID638019259 
Productpeptidase M50 
Protein accessionYP_625817 
Protein GI107028722 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.189316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGCTT CCCTGATACA GACCATCGCC GTCTACGCGC TGCCCGTGAT CTTCGCGATC 
ACGCTGCACG AGGCCGCGCA TGGCTACGCC GCGCGCCTGC TCGGCGACAA CACCGCCTAC 
GCGATGGGAC GCGTGTCGTT CAATCCGATG CGCCACATCG ACCCGCTCGG CACGATCGCG 
ATTCCGCTCG CGATGTACTT CCTGACCGGC GGCGCATTCC TGTTCGGCTA TGCGAAGCCG 
GTGCCGGTGT CGTTCGGCAA CCTGCGCAAT CCGCGCTGGG GCAGCCTGTG GGTCGCGCTC 
GCGGGCCCGG CCTGCAACTT CGTGCAGGCG CTCGTCTGGG GTCTGCTGAC CCTGGTGCTG 
CCGGCCGTCG GCGTCGACGA GCCGTTTTTC ACGCGGATGG CGTTCGCCGG CGTCAGCGCG 
AACCTCGTGC TCGGCGTGCT GAACCTGTTT CCGCTGCCGC CGCTCGACGG CGGCCGCATC 
CTGGCGGCGC TGCTGCCGAC CAGGCAATCG ATCGCGCTGT CGCGCATCGA GCCGTACGGT 
TTCATCATCG TCCTCGTGCT CGTCACGACG GGCGTGCTGA CGAACTTCTG GCTGCGTCCG 
CTCGTCAACG TCGGCTACGC CGTCCTGAGC GCCATCCTGT CTCCCTTCGC CTCGCTTTTC 
TAA
 
Protein sequence
MDASLIQTIA VYALPVIFAI TLHEAAHGYA ARLLGDNTAY AMGRVSFNPM RHIDPLGTIA 
IPLAMYFLTG GAFLFGYAKP VPVSFGNLRN PRWGSLWVAL AGPACNFVQA LVWGLLTLVL 
PAVGVDEPFF TRMAFAGVSA NLVLGVLNLF PLPPLDGGRI LAALLPTRQS IALSRIEPYG 
FIIVLVLVTT GVLTNFWLRP LVNVGYAVLS AILSPFASLF