Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5978 |
Symbol | |
ID | 4096601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 560739 |
End bp | 561371 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638019258 |
Product | Sua5/YciO/YrdC/YwlC |
Protein accession | YP_625816 |
Protein GI | 107028721 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.14868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCCAGT TCTTCAGGAT TCATCCGGAT AATCCGCAGC CGCGCCTGAT CAAGCAGGCG GTGGAGATCG TCAGCAAGGG CGGCGTGATC GCGATGCCGA CCGATTCGAG CTATGCGCTC GCGTGCCATC TCGACGACAA GGATGCGGTC GAGCGCGTGC GGCGGATTCG CGGCCTCGAC GAGAAGCAGC ACCTGTCGCT GCTCGTGCGC GACCTGTCGG AGCTCGCCAA CTTCGCGATG GTCGACAACC GCCAGTACCG GCAGATCAAG TCGGTGACGC CGGGCCCGTA CGTGTTCATC CTGCAGGCGA CGAAGGAAGT GCCGCGCCGG CTGTCGCACC CGTCGCGCAA GACGATCGGG CTGCGCGTGC CGGATCACGC GATCACGCTC GCGCTGCTGG AGTCGCTCGG CCAGCCGCTG CTCGGCACGA CGCTGATCCT GCCGCCGGAC GACGAACCGC TGAACGATCC CGAGGAAATC CGCACGCGGC TCGAGAAACA GGTCGACCTC GTGATCGACG GCGGCGCGTG CCCGCGCGAA CCGTCGACGG TGATCGACCT GACCGGCGAT GCGCCCGAAC TCATCCGTGC GGGGCGCGGC GCGCTCGAAC CGTTCGGACT CTCGGCCGCA TGA
|
Protein sequence | MSQFFRIHPD NPQPRLIKQA VEIVSKGGVI AMPTDSSYAL ACHLDDKDAV ERVRRIRGLD EKQHLSLLVR DLSELANFAM VDNRQYRQIK SVTPGPYVFI LQATKEVPRR LSHPSRKTIG LRVPDHAITL ALLESLGQPL LGTTLILPPD DEPLNDPEEI RTRLEKQVDL VIDGGACPRE PSTVIDLTGD APELIRAGRG ALEPFGLSAA
|
| |