Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5958 |
Symbol | |
ID | 4097246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 537632 |
End bp | 538360 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638019238 |
Product | 17 kDa surface antigen |
Protein accession | YP_625796 |
Protein GI | 107028701 |
COG category | [S] Function unknown |
COG ID | [COG3134] Predicted outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAACC AGACTCAGAC CACGCCGCAA AAGCAACGCC TCCACCCGCT GATCGCCACC GCAGCGGGCG CCGTCATCGT CGCCAGCCTC GCGGCGACGG CAGCGATCAC GGGCGTCTTC CCGAAAGCCA CCAGCAGCAA TGAACAGAAT GGCCAGACCC AGGCCGCGCT GATCGCGTCG CAGCCGGCCG TCGATACGGC CGCGGCCGCC AGCGCCGCGC TGGCCGCGCA AGCGCAGCGG CAGGCCGCGG AACAGGCCGC CGCGCAGCAG AAGGCCGCCG TCGCGCAGGC CGAGCCGAAA CCGGCGCCGC GCCCGGCCAC GCCGCACCGC CGTCACACGA CCGCGCCGCA GCCGCCGCAA TACGCGCAGC AGCCGTCGGC GCCGGCGCAA GCCTACTGCC AGAGCTGCGG CACGGTCGTC GCGATCACGC AGACGCGCAC GCCGGGCCAG AGCTCGGGGA TCGGCGCCGT GGGCGGCGCA GCGGCCGGTG GTCTGCTCGG CAACCAGTTC GGCAACGGCA ACGGCCGCAC CGCGATGACG ATCATCGGCG CGCTGGGCGG CGGTCTCGCC GGCAACCAGG TCGAGAAGCA GGTCCGCGCT GAAACCGACT ATCAGGTGCA AGTGCAGATG GAAAGCGGCG CGACGCGCAC GTTCACGTAC CACAACCCGC CGCCGTTCGG CCAGGGTCAG CGCGTGCGGA TCGAGAACGG CACGCTGGTC GGCGCTTGA
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Protein sequence | MDNQTQTTPQ KQRLHPLIAT AAGAVIVASL AATAAITGVF PKATSSNEQN GQTQAALIAS QPAVDTAAAA SAALAAQAQR QAAEQAAAQQ KAAVAQAEPK PAPRPATPHR RHTTAPQPPQ YAQQPSAPAQ AYCQSCGTVV AITQTRTPGQ SSGIGAVGGA AAGGLLGNQF GNGNGRTAMT IIGALGGGLA GNQVEKQVRA ETDYQVQVQM ESGATRTFTY HNPPPFGQGQ RVRIENGTLV GA
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