Gene Bcen_5906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5906 
Symbol 
ID4097057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp472491 
End bp473186 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content67% 
IMG OID638019184 
Producthistidine utilization repressor 
Protein accessionYP_625744 
Protein GI107028649 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID[TIGR02018] histidine utilization repressor, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCGC CGGTCTACCA GGAGATCAAG GATTTCATCC TGGCCCGCAT CCATGCCGGC 
GAGTGGGAGG AGGGCGACCA GGTGCCGTCC GAGAACGAGC TGGCGCGCGA GTTCAAGGTG
GCGCGCATGA CCGTCAACCG CGCGCTGCGC GAGTTGACGG CAGAGCAGGT GCTCACGCGC
ATGAAGGGCG CGGGCACCTA CGTCGCGCGT CCGAAGTACG AGTCGACGCT GGTGGCGATC
CGCAGCATCT CCGAGGAAGT CGGCGCGCGC GGGCATGCAT ACCGCGCGAG CGTGCTCGGG
CTCGACACGA TCCGCGCCGA CGAAGCCCTC GCCGACGAGA TGCAGGTGGC CGTGCGCACG
AAGCTGTTTC ATTCGCAGGT GCTGCACTTC GAGAACGACG AACCGGTGCA GCTCGAAGAA
CGGTGGGTGA ATCCGGCGGT CGCGCCGGAT TACGCCGAGC AGGATTTCAC GAACACGACG
CCGAACCAGT ACCTGATGCG CGCGGCGCCG CTGCAGCGCG TCGAGTACCG GATCGAAGCG
GCGGCCCCGG CGCCGGAGCG ACGCGAGCAG CTGCGGATGG ACGGCGTCGA GCCGTGTCTG
GTTTTACATC GGCGCACCTG GTCGCAGGGC GTCGTCGCCT CGGTGGCGAA TTTGTGGCAT
CCCGGCAGCC GTTATCGCTT CACCGGGCAT TTCTGA
 
Protein sequence
MSAPVYQEIK DFILARIHAG EWEEGDQVPS ENELAREFKV ARMTVNRALR ELTAEQVLTR 
MKGAGTYVAR PKYESTLVAI RSISEEVGAR GHAYRASVLG LDTIRADEAL ADEMQVAVRT
KLFHSQVLHF ENDEPVQLEE RWVNPAVAPD YAEQDFTNTT PNQYLMRAAP LQRVEYRIEA
AAPAPERREQ LRMDGVEPCL VLHRRTWSQG VVASVANLWH PGSRYRFTGH F