Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5872 |
Symbol | |
ID | 4096933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 435404 |
End bp | 436429 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638019149 |
Product | transposase IS116/IS110/IS902 |
Protein accession | YP_625710 |
Protein GI | 107028615 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACGG TATCGCTGAT CGGAGTCGAT CTCGGCAAGC ACTGCTTCCA CCTGCATGGG CAGGATGCGT CAGGCAGGAT GGTGTTCCGT AAGAAGCTCA CGCGTAGCCA GATGTTCACG CTGCTGGGCA ATTTCCCGAG TTGTACGGTG GTCATGGAGG CCTGCGCCGG TGCGCACTGG ATCGCCCGCC GACTTCAGGC GCTGGGCCAC GAGGCCAAGC TGATTTCCCC TCAGTTCGTC AAACCGTTCC GGCAAGGCAA CAAGAACGAT TTCGCGGATG CCCAGGCGAT CTGCGAAGCT GCTTCACGAC CGAGCATGCG TTTCGTGAGC CCGCACAACG AAGCTCAGCA GATCGTTTCA GCCTTGCATC GCGTGCGCGG GGGGCTGGTG CGCGAGCGCA CCGGCACGAT CAACCAAATT CATGCGTTTC TGTTGGAATT CGGCATCAGC TTGCCGCGCG GCATGGCGGT GATCCGGCGA CTGCCCGCCG TGCTGGAGGC AGAATCGTTG CCGCCGCGGC TGGTAAGCGT GATCGAACGT CTGCACGCGC ACTGCAAGTA TCTGGACGAG CAGATCCATC AGCTCGAACG TGAGTTGCTT ACCCAGCTAC ACGAGGACGA ACGCAGCGAG CGGCTGCTCG AGATTCCCGG CATTGGCCCG ATGACCGCCA GCGTGTTGAT GTCGGAGTTG GGCGATGCGC GCCAATATGG TTCGGCAAGG CAGTTTGCGG CGTCGGTCGG GCTGGTGCCG CGGCAGTACA GCACCGGCGG CAAACCAACG CTCCTCGGCA TCAGCAAGCG CGGGGACAAG GAATTGCGGC GGCTGCTGGT GCAATGTGCG CGGACCATCA TGCAGCGCAT CGAGCACCGC ACGGATGCAT TGGGCGTCTG GATTCGCGGC CTGTTGGCGC GACGACATTC GAACGTAGTG GCTTGCGCGT TGGCCAATAA ATTGGCGAGG ATCGCGTGGG CCATCCTCGC CAAAGGGACA CACTACCGAA GCACCGAGGC TGTTCCCGCG GTCTGA
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Protein sequence | MDTVSLIGVD LGKHCFHLHG QDASGRMVFR KKLTRSQMFT LLGNFPSCTV VMEACAGAHW IARRLQALGH EAKLISPQFV KPFRQGNKND FADAQAICEA ASRPSMRFVS PHNEAQQIVS ALHRVRGGLV RERTGTINQI HAFLLEFGIS LPRGMAVIRR LPAVLEAESL PPRLVSVIER LHAHCKYLDE QIHQLERELL TQLHEDERSE RLLEIPGIGP MTASVLMSEL GDARQYGSAR QFAASVGLVP RQYSTGGKPT LLGISKRGDK ELRRLLVQCA RTIMQRIEHR TDALGVWIRG LLARRHSNVV ACALANKLAR IAWAILAKGT HYRSTEAVPA V
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