Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5837 |
Symbol | |
ID | 4096562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 390717 |
End bp | 391955 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638019109 |
Product | secretion protein HlyD |
Protein accession | YP_625675 |
Protein GI | 107028580 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.91911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGTCG AACGGGTTCC ATACCGCTTA ATCACTGCCG CAACGGTTGC CGTTTTCCTG GCCGCGTGCG GGAAAAAAGA AGCGGCGCCG CCGCCGCAAA CGCCGGAAGT CGGCGTCGTC ACCGTCCAGC CGCAAGCCGT GCCGGCGGTG ACCGAACTGC CGGGCCGCAC CAGCGCGTTC CTGGTCGCGC AAGTGCGTGC GCGGGTCGAC GGCATCGTGC TGCGCCGCGA ATTCACCGAA GGCACCGACG TCAAGGCCGG TCAGCGCCTC TACAAGATCG ATCCGGCGCC GTACATCGCG GCGCTGAACA GCGCGAAGGC GACGCTCGCG AGGGCGCAGG CGAACCTCGT CACGCAGAAC GCGCTGGTCG CGCGCTACAA GGTGCTGGTC GCCGCGAACG CGGTCAGCAA GCAGGATTAC GACAACGCAG TCGCCACGCA AGGCCAGGCC GCGGCGGACG TCGCAGCCGG CAGGGCGGCG GTCGATACCG CGCAGATCAA CCTCGGCTAT ACGGACGTCG TGTCGCCGAT CAGCGGCCGC GTCGGCATCT CGCAAGTGAC GCTGGGCGCT TACGTGCAGG CGAGCCAGGC GACGCTGATG TCGACCGTGC AGCAGCTCGA TCCGGTGTAC GTCGACCTCA CGCAGTCGAG CCTCGAAGGG CTGAAGCTGC GTCAGGACGT GCAGAGCGGC CGTCTGAAGA CGAGCGGCCC GGGCGCGGCC AAGGTGTCGC TGATCCTCGA GGACGGCAAG ACCTACTCGG AGCCGGGCAA GCTGCAGTTC TCGGATGTGA CGGTCGACCA GACCACCGGC TCGGTGACGA TCCGCGCGGT GTTCCCGAAC CCGAATCGCG TGCTGCTGCC GGGGATGTTC GTGCGCGCAC GGATCGAGGA AGGCGTGAAC GAGAACGCGT TCCTGGTGCC GCAGATCGGC GTCACGCATG ACCAGAAGGG TCAGGCGATC GCACTCGTCG TGAGCGCGGC CAACAAGGTC GAGATGCGTC CGTTGACGAC GACCGGCACG TACGGTCAGA ACTGGATCGT CGAAGGCGGT CTGCAGGCGG GCGATCACGT GATCGTACAA GGCGTCGACA AGGTGCGCCC GGGCGCGACC GTGAAGACCG TCGCCGCGCA GCTCGCCCCG GCGCCGGACG CCGCATCCGC CACATCGGCA GGCGCCGCGC CGGCGAGTAC CGCGACGAGT GCCGCAGCGA GTTCGGCCGC CGCGTCCAAC GCGCAATAA
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Protein sequence | MRVERVPYRL ITAATVAVFL AACGKKEAAP PPQTPEVGVV TVQPQAVPAV TELPGRTSAF LVAQVRARVD GIVLRREFTE GTDVKAGQRL YKIDPAPYIA ALNSAKATLA RAQANLVTQN ALVARYKVLV AANAVSKQDY DNAVATQGQA AADVAAGRAA VDTAQINLGY TDVVSPISGR VGISQVTLGA YVQASQATLM STVQQLDPVY VDLTQSSLEG LKLRQDVQSG RLKTSGPGAA KVSLILEDGK TYSEPGKLQF SDVTVDQTTG SVTIRAVFPN PNRVLLPGMF VRARIEEGVN ENAFLVPQIG VTHDQKGQAI ALVVSAANKV EMRPLTTTGT YGQNWIVEGG LQAGDHVIVQ GVDKVRPGAT VKTVAAQLAP APDAASATSA GAAPASTATS AAASSAAASN AQ
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