Gene Bcen_5748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5748 
Symbol 
ID4096377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp288710 
End bp289501 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content66% 
IMG OID638019023 
ProductABC transporter related 
Protein accessionYP_625589 
Protein GI107028494 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4598] ABC-type histidine transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACCG CTGCTCCCGT TGCGCTGTCG GTCAGAAACA TCCACAAGTC GTTCGGCGAT 
CACCATGTGC TGAAGGGCAT TTCGCTCGAC GCGCACGAGG GCGACGTCAT CTCGATCCTC
GGCGCGAGCG GATCGGGCAA GAGCACGTTC CTGCGTTGCC TGAACCTGCT CGAGACCCCC
GACGACGGCT CCGTCGCGCT CGCGGGCGAA GAGCTGGCGA TGAAGCGCGC ACGCGACGGC
AAGCTGCATC CGAGCGACCG GCGCCAGGTC GACCGGATTC GCTCGCAGCT CGGCATGGTG
TTCCAGAACT TCAACCTGTG GTCGCACATG ACGGTGCTCG ACAACCTCGT CGAAGGGCCG
CTGCGCGTGC AGAAGCGCAG TCGCGCGGAA GCGGTGGAGG AAGCCGAGGC GCTGCTCGCA
CGCGTTGGCC TCGCGGACAA GCGCGGCTAC TATCCCGCGC ACCTGTCGGG CGGCCAGCAG
CAGCGTGTCG CCATTGCCCG CGCGCTGGCG ATGCATCCGA AGGTGATGCT GTTCGACGAA
CCGACGTCGG CGCTCGACCC GGAGCTGGTG GGCGAGGTGC TGCGCGTAAT GCGCTCGCTG
GCGGAAGAGG GGCGCACGAT GCTGGTCGTC ACGCATGAAA TGGGCTTTGC ACGCCACGTG
TCGAACCGCG TGATGTTCCT GCATCAGGGC GAGGTCGATA CGGACGGGAC GCCCGACGAA
GTCTTCGGCG GCCAGGCCTC CGAGCGCTTC CGGCAATTCG TGTCGAGCCA CCACGACCGC
ACCACGAACT GA
 
Protein sequence
MNTAAPVALS VRNIHKSFGD HHVLKGISLD AHEGDVISIL GASGSGKSTF LRCLNLLETP 
DDGSVALAGE ELAMKRARDG KLHPSDRRQV DRIRSQLGMV FQNFNLWSHM TVLDNLVEGP
LRVQKRSRAE AVEEAEALLA RVGLADKRGY YPAHLSGGQQ QRVAIARALA MHPKVMLFDE
PTSALDPELV GEVLRVMRSL AEEGRTMLVV THEMGFARHV SNRVMFLHQG EVDTDGTPDE
VFGGQASERF RQFVSSHHDR TTN