Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5720 |
Symbol | |
ID | 4096330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | - |
Start bp | 256417 |
End bp | 259119 |
Gene Length | 2703 bp |
Protein Length | 900 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638018996 |
Product | alpha-1,2-mannosidase, putative |
Protein accession | YP_625562 |
Protein GI | 107028467 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3537] Putative alpha-1,2-mannosidase |
TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0689456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA CACGACTCTT GATCGTCGCT GCGCTGACGG GTGCGGCGCT CGCCGCGTGT GGCGGCGATG ACGTGAACAG CCCGTCGATC GCCGGCAGCG GCGGCACCAC CGGTAATGGC GGCACGGACG GGCCATCGAC ATCGGGGCCA TCGCAGCCCG GGCAGCCATC ACAACCCGGC CAACCGTCCA CGCCCGCGCG CACCAACATG CAGCTGACGC AGTTCGTCAA CCCGCTGATC GGCACGCAGG TCAATAATGA CTCCGGCTAC GGGGGCAACG TGAACCCGGG CGCCACCGTG CCGTTCGGAA TGGTGGATTT CGGTCCGAAC ACACCGCGCT ACAACTTCAA CGGCTCGGGC GGCTACCTGT CGTCGGGTGG GTCGGGCGGC ACGATCGACT TCTTCAGCGT CACGCACCTG AGCGGCGTCG GCTGTCCGGG GCAGGGCGCG GTCGCGATGC TGCCCACCGA CGGGGCGAAC GCCATCGCGC CGGGCGGCAG ACCGACCGGT ATCGCATACA GCTATTCGGA CGAAGTGGCT CAACCGGGCT ACTACAAGGT ACGCCTCGCG AGTGGCATCA CGACGGAGCT GAGCGCGACC GCGCGCGCCG GCCTCGCGCG CTTTACGTAC ACGGACAAGG ACAAGGGTTT CTTCTCGGTC GATGCGAAGC TGAACGGCAA CAGCGATTCG GGCAGCACGA GCATCACCGC GAACAACGTG GCGCTTGCGA TCGCCGGCGA CGGCAAGTCG ATGAGCGGGC AGGCGGTCGC GCCGGCGTTC TGCACGCCGT ACGGCACGAT CTGGAATGCT CCCGTGTATT TCTACGCGAC CTTCGACAAG CCGCTGCGCA AGCAAACCGG TACGTCGTCG GTGAATACCG CGAGCAACGG CGCCGCGACG CTGCAGTTCG ACCTGACCGA TGCCGACAAG ACCGTCACCG TGAAGGTCGG CATTTCGTCC GTCAGCGTGT CGAATGCGCA GGCGAACCTC GCGGCCGAGG GTGAAAAACT CGCGTTCGAC GATGCGCGTA CGAAGGCTTC CGCAGCGTGG AACGACCGGC TCAACACGAT CCAGATCGAT CAGGCAAAGG ATCCGGCTTC GCTGAACGCC ACGCAGAAGG CGAACCTCAC GAAGTTCTAC ACGGCGCTGT ATCACGTGTT CAGCGCGCCG ACGCTCTATA GCGACACGAA TGGCGAGTTC CGCAGCATGC GTCAGCCGAG GAACGCGAAC GGCAGCTATC CGACCTCGGT CGACCGGACC GGCACCGTCC CGCAGCGTGC CACCGCGAAT GTGAAGGACT ACGCGTACAA ACGTCCGGAC GGCTCGCAAG GCGGCGGCGC CAATCACTAC ACGGGCTTCT CGCTGTGGGA TACGTACCGG TCGCAGGCGC AACTGCTGGC ATTGCTTGCC CCGCGGGAAG CGAGCGACAT GATGCAGTCG CTCGTCGTCG ACGGGCTGCA ATGCGGCGCG TTCCCGCACT GGGTCGACGG CAGCGACGAT TCGACGCCGA TGGCGGGCGA CAACGCGCTG AACGTGATTG CCGGTTCCTA CAAGTTCGGC GCGACCGACT TCGACCTGGT GTCGGCCGCA CGGCTGACGA AGCAGTCGGT GTTCGATCCG TCGAGCGCGT GCAACGACCG CGCGAGTGCG CCCGGGCTCG CCAACTTCCT GACGGCCCAT TACCTGTCGC AGAGCGACGA CGGCCATTCG TCGTCCGCGA CCATCGAGCG CGTGCTGAGC GACCGCTCCG CGGCCGCGTT CCTGCAGGCG CTGCCTGCCG GCGTGCTGAA CGCGCCGTCG GTTGGCGTGA CGTCGGACAA CATCGGCACG CTGTACACGC GTGCGTCGTG GTGGCGCAAC ATCTTCGACT ACCCGAACAA GGTGATCGCC GCGCGCAATG CGCCGCCGGC CGGCGCGGCG CCCGGCACGC TGGGCACGCT CGTGCAGGGC GCGTTCCACG AATCGACGGA GCCGAACTAC TTCTGGACCT TCGCGCAGGA CTGGTCCGCG CTGATCGACG CGATCGGCGG CAAGCAGGCG GCCGTCGCGC GGCTGAACAA GCTGTTCTCG ATCACGACGC CGTATTCGAC CGTGCCGACC GCCGGCAGCC TGAACGGTGG CGAATCGTCG AACGGCCTCT ATATCGGCAA CGAACCGTCG TTCCAGTCGC CGTGGGGCTA CAACTGGGCC GGGCAACCGA GCGGGGCGCA GTACATCCTG CCGATCATCA TGGCGCAGAC GTTCGGCACC GGCCGCGACG GCCTGCCGGG CAACGACGAC ATGGGCGCGA CGTCGAGCTG GTACGTGTGG GCGACGCTCG GCATGTTCCC GGTGATTCCG TCGGAAGCCG GTCTTGCGCT GTCGACGCCG CAGTTCAGCG GGATCACGGT CTGGCTCGGC AACGGCAAGA CGCTGCGACT CGAAAGCGAC AAGCAGGTCG CGGCCGACGA CACCGGCCGT GCCGCGTTCC CGTACATCCA GTCGCTGAAG GTCAACGGCG CGGACTACGC GGGCTCGTGG CTGCCGATGG GCAAGATCGC CAATGGCGGC ACGATGAGCT ATGCGCTGTC CGCCACGCCG ACGCAATGGG CGGCCGCCGA CAACCTGACG CCGCCATCCG GGCCGAATGC GGACTACACG CAGATGACGG CGGGCAGTGC GTCAACCGCG ATGCGCATGC AGCACCAGGG CGGCGTGCGA TGA
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Protein sequence | MKNTRLLIVA ALTGAALAAC GGDDVNSPSI AGSGGTTGNG GTDGPSTSGP SQPGQPSQPG QPSTPARTNM QLTQFVNPLI GTQVNNDSGY GGNVNPGATV PFGMVDFGPN TPRYNFNGSG GYLSSGGSGG TIDFFSVTHL SGVGCPGQGA VAMLPTDGAN AIAPGGRPTG IAYSYSDEVA QPGYYKVRLA SGITTELSAT ARAGLARFTY TDKDKGFFSV DAKLNGNSDS GSTSITANNV ALAIAGDGKS MSGQAVAPAF CTPYGTIWNA PVYFYATFDK PLRKQTGTSS VNTASNGAAT LQFDLTDADK TVTVKVGISS VSVSNAQANL AAEGEKLAFD DARTKASAAW NDRLNTIQID QAKDPASLNA TQKANLTKFY TALYHVFSAP TLYSDTNGEF RSMRQPRNAN GSYPTSVDRT GTVPQRATAN VKDYAYKRPD GSQGGGANHY TGFSLWDTYR SQAQLLALLA PREASDMMQS LVVDGLQCGA FPHWVDGSDD STPMAGDNAL NVIAGSYKFG ATDFDLVSAA RLTKQSVFDP SSACNDRASA PGLANFLTAH YLSQSDDGHS SSATIERVLS DRSAAAFLQA LPAGVLNAPS VGVTSDNIGT LYTRASWWRN IFDYPNKVIA ARNAPPAGAA PGTLGTLVQG AFHESTEPNY FWTFAQDWSA LIDAIGGKQA AVARLNKLFS ITTPYSTVPT AGSLNGGESS NGLYIGNEPS FQSPWGYNWA GQPSGAQYIL PIIMAQTFGT GRDGLPGNDD MGATSSWYVW ATLGMFPVIP SEAGLALSTP QFSGITVWLG NGKTLRLESD KQVAADDTGR AAFPYIQSLK VNGADYAGSW LPMGKIANGG TMSYALSATP TQWAAADNLT PPSGPNADYT QMTAGSASTA MRMQHQGGVR
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