| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5708 |
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| Symbol | |
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| ID | 4096858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008062 |
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| Strand | + |
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| Start bp | 240109 |
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| End bp | 241398 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638018984 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_625550 |
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| Protein GI | 107028455 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTTC ATCCGTTTAT CCGGCGCGCG CCGCGCACGA TACTTCGCAC CGTCAGGCGC
CACGCGCCCC ACTCGCCATC TCGTACGCAT ATGAACCGAT ATCCAGGATT GAAGCGCATC
GCGCGATCGG CCGCGCTGGC CGCCGTTCCG CTGGCCGCGC TCGTCGCGTT GTCCGGCTGC
CAGTCGGACG ACAAGGCCCC GGCCGCGACG CCGAGCGTGA TCGTCAGCGC ACCCGTCGCG
CGCGACGTCA ACGACGTCGA CGTCTACACC GGCCGCTTCG AGGCGGTTGA CACCGTCGAC
GTGCGCCCGC GCGTGAGCGG CTATCTCGAC AAGGTCGCGT TCCAGGACGG CGCGACCGTC
CGCAAGGGCG ACCTGCTGTT CGTCATCGAC CCGCGCCCGT ACCAGGCGGC CGTCACCGCC
GCGCAGGGCG CGCTCGAACG CGCGCAGTCG CAACTGAAGC TGAGCCGGCA GGATTTCGAG
CGCGCGAGCA TCCTGATCAA GACCGACACG ATCGCGCAGA GCCTCTACGA CCAGCGCAGG
CAGGCGGTGC AAAGCGCGCA GGCCGAGGTG ACCAGCGCGC AAGGCGCACT CGAACGCGCG
CGGCTCGACC TGTCGTTCAC GCGCATCGTC GCGCCGATGT CCGGCCGCAT CAGCCGCAAA
CTCGTGAGCG AGGGCAATCT CGTGAAAGGC GGCGACAGCG ACGCGACCGT GCTGACGACG
ATCGTGTCGC AGGACCCGAT CGACATCTAC TTCGACGTCG ACGAGGAAAG CTACCTGCGC
TATACGCGCG AAGCACGGAA AGGCGGCGGC AACGCGTCGT CGCGGCAGGT CGCGATCGCG
CTGCCGGGCG ACGTGCAGCC GTCGCTGACG GGGACGATGG ATTTCGTCGA CAACCGTCTC
GACGACTCGA CCGGCACGCT GCGCCAGCGT GCGCGCGTCG CGAATCCGGA CCGGCGCCTG
AGCCCTGGCC AGTTCGGCCG CGTGTATCTG TCGAGCCGCG TCGCGCACCC TGCGCTGCTC
GTGCCGGATG CGGCGGTCGC GACCGATGCG ACGCGCCGCG TGCTGTACTT CGTCGACGCG
AACGGCACCG TCGCGATCCG CCCGGTGACG CCCGGCCGCC TGTACGGCAA CCTGCGCGAG
ATCGACGCGG GGCTGAACGC GGGCGATACC GTGATCGTCG ACGGCTTCCA GCGCGTGCAG
GCCGGCGACA AGGTCAAGGC CGTGCCGCGC GCGATCGAAG CGGCCGCGGT GGCCCGCGCG
GCGAGCGGCA CGACCGGGAG CGCGCAATGA
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| Protein sequence | MPLHPFIRRA PRTILRTVRR HAPHSPSRTH MNRYPGLKRI ARSAALAAVP LAALVALSGC
QSDDKAPAAT PSVIVSAPVA RDVNDVDVYT GRFEAVDTVD VRPRVSGYLD KVAFQDGATV
RKGDLLFVID PRPYQAAVTA AQGALERAQS QLKLSRQDFE RASILIKTDT IAQSLYDQRR
QAVQSAQAEV TSAQGALERA RLDLSFTRIV APMSGRISRK LVSEGNLVKG GDSDATVLTT
IVSQDPIDIY FDVDEESYLR YTREARKGGG NASSRQVAIA LPGDVQPSLT GTMDFVDNRL
DDSTGTLRQR ARVANPDRRL SPGQFGRVYL SSRVAHPALL VPDAAVATDA TRRVLYFVDA
NGTVAIRPVT PGRLYGNLRE IDAGLNAGDT VIVDGFQRVQ AGDKVKAVPR AIEAAAVARA
ASGTTGSAQ
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