Gene Bcen_5678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5678 
Symbol 
ID4096808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand+ 
Start bp213311 
End bp213964 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content65% 
IMG OID638018954 
ProductTetR family transcriptional regulator 
Protein accessionYP_625520 
Protein GI107028425 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGTTGG ATGAGGATGC GGATGCCGGA CAAAAGACTT ATCACCACGG GGATCTGCGT 
CGAGCGATCA TCGAAACGGC GCTCGATACG CTGCAGGAAC AACAGGGCTG GCAGTTCACG 
TTGCGCGAAA TCGCGCGGCG CGCGAACGTC AGCCACTCCG CGCCGTACCG GCATTTCCCG 
GACAAGGCCG CGCTGCTGCA CGAGCTCGCG CTGATCGGTT TCGATCGCCT GCACGACGAT 
CTCGTCGCGT CTGTCGATCC CTCGGCCGAT GCACCGGATG TCCTGCTGGC GCTCGCCCAT 
GCCCATCTCG CGTTCGGGCA ACGCAACCCG GATCTGTATC GCCTGATGTT TGCCGCGGAC 
GCGGGAGAGC CTTCGGATAT CCATCTCGAC CCGCGCGTGC AGGCACCCTT CCTGCTGGTC 
GTCGAGATCC TCGAACACGG GCAGCGTGCC GGCACGATTC GCCCGCGCCC GGCGCTGGGT 
CAGGCAACCG CGTGCTGGGC CCACCTCCAT GGCCTGACGA TGCTCGCGAT CGACCGGCGG 
CTGGTGCGCG AGAAGGTCGG CGATCACGCG ATCGAAGATG CGCTGACGAC GTTGCTGGAC 
GGACTCGTGC TGCCTGAGAA GCGCCCGCGG GCGACCAAGG CGAAAAAGTC TTGA
 
Protein sequence
MSLDEDADAG QKTYHHGDLR RAIIETALDT LQEQQGWQFT LREIARRANV SHSAPYRHFP 
DKAALLHELA LIGFDRLHDD LVASVDPSAD APDVLLALAH AHLAFGQRNP DLYRLMFAAD 
AGEPSDIHLD PRVQAPFLLV VEILEHGQRA GTIRPRPALG QATACWAHLH GLTMLAIDRR 
LVREKVGDHA IEDALTTLLD GLVLPEKRPR ATKAKKS