Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5601 |
Symbol | |
ID | 4096789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 121996 |
End bp | 123423 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638018877 |
Product | RND efflux system, outer membrane lipoprotein, NodT |
Protein accession | YP_625443 |
Protein GI | 107028348 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGCA CACTGATCGC CCTTGTTTGC ACGGGCGTGC TGGCAGGCTG CACGCTGGAC CCGACGTACC AAAGGCCGGC CGCACCGGTC GACGACACCT GGTCCACCGT GCCCGCGCTG GCGCAGCCGA AGGCCGCGCA GAGCACGGCT GCGGCACCGC TGGGAGCCGA CCTCGGCTGG CGCGATTTCT TCAAGGACCC GCGACTGCAA AAGCTGATCG AACTCGCGCT CGCGAACAAC CGCGACATGC GCGTCGCCGC GCTCAACGTG GCGCAGTACG AAGCGCAGTA CCGCATTGCG CGCGCCAACG TCGGACCGGC CATCAACGCA TCCGGCTCGG TCACGCGCGA ACGCGTGGCC GGCTCCACGA GCGCATACAG TTCGAGCAGC GCGAGCGTGG GCCTCACGTC GTGGGAAATC GACTTCTTCG GCCGCCTGCG CAGCCTCAAG CGTCAGGCGC TGGAGCAGTA CCTCGCCACG GACGCCGCGC GCACCAGCAC GCAGATCAGC CTGATCGCGA CCGTCGCCAC CGACTATCTG CAACTGCGCT CCGACGAGAC GTCGTTGCAG ATCGCGCAGA ACACCGTGGA TGCGGACCAG CACACCTACG ACCTCACGGT GAGCATGATG AAAATGGGCA GCGCGTCGCT GCAGGACGTG CGCCAGGCCG AAAATTCGCT GGCGAGCGCG CGGTCGAGTC TCGCCTCGTA CACGCGTGCG GTCGCGCAGG ACCGCAACAA CCTGGTGGCC GAAATCGGTG CGCCGCTGCC CGACGATCTG CCGCAAGGCG CTTCGCTGAT GGAAAGCGAG AACACGTTCG CGGACATCGG CGAAGGCGTG CCGTCGGACC TGCTCGCGCG CCGGCCCGAC ATCGTCGAAG CCGAGCACAC GCTCAAGGCC GCCAACGCCA ACATCGGCGC CGCGCGCGCC GCGTTCTTTC CGAAGATCGA GCTGACGGCT TCCGCGGGCA CCACGAGCGG CAGCCTCTCG AACCTGTTCA AGGCGGGCAC GGGGGCGTGG ACGTTTGCGC CGTCCATTTC GGTGCCCATC TTCGACTTCG GCTACAACCG CGCCACGCTG GACGTGGCGA AGGTCGAGAA GGACATCGAC ATCGCCAACT ACGAAAAGGC CATCCAGACG GCGTTCAAGG AAGTGTCGAA TGCACTCGCG GGACGCACCA CGTACGTCAC GCAGGTAGCC GCGGATCGCG ACTACGTCAA CTCCGCGCAG CAGTACTACG ACCTCGCGCA GGCACGCTAC CGCAGCGGCA CCGACAGCTT CCTGACCCTG CTGGACGCGC AGCGCACGCT CTACGCCGCG CAACAGCAAC TGGTCACGGA CATGCTCGCC AAGCAGTCCA ATCTCGTCAC GCTGTACAAG GTGCTGGGCG GCGGCTGGCG GGAAACGAGC GCGGTGGCGC AGCGGTAG
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Protein sequence | MKRTLIALVC TGVLAGCTLD PTYQRPAAPV DDTWSTVPAL AQPKAAQSTA AAPLGADLGW RDFFKDPRLQ KLIELALANN RDMRVAALNV AQYEAQYRIA RANVGPAINA SGSVTRERVA GSTSAYSSSS ASVGLTSWEI DFFGRLRSLK RQALEQYLAT DAARTSTQIS LIATVATDYL QLRSDETSLQ IAQNTVDADQ HTYDLTVSMM KMGSASLQDV RQAENSLASA RSSLASYTRA VAQDRNNLVA EIGAPLPDDL PQGASLMESE NTFADIGEGV PSDLLARRPD IVEAEHTLKA ANANIGAARA AFFPKIELTA SAGTTSGSLS NLFKAGTGAW TFAPSISVPI FDFGYNRATL DVAKVEKDID IANYEKAIQT AFKEVSNALA GRTTYVTQVA ADRDYVNSAQ QYYDLAQARY RSGTDSFLTL LDAQRTLYAA QQQLVTDMLA KQSNLVTLYK VLGGGWRETS AVAQR
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