Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5599 |
Symbol | |
ID | 4096787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 117533 |
End bp | 118789 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638018875 |
Product | secretion protein HlyD |
Protein accession | YP_625441 |
Protein GI | 107028346 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACGC CCATTCTCCC GAACCACGCG CACCACCCCA TGACGTGCAG GCCGCGCCAG CTGTTTGCCG CACTCTCGAT ACTTGCGATA GTCGGAACCG CCGGCTGCAA CAGGCAAACC GGCGCACCGC CCGGCGGCTT CGCCGCGCAG ACCGCACAGG TGGGCGTGCT CTCGCTCGCG CCGCAGCGCA TCGTCGAAAC CACCGAACTC TCCGGCCGCC TTTCCTCGCA GAAGGTCTCC GACGTGCGAC CGCAGGTGAG CGGCATCATC CTCAAGCGCC TGTTCATGGA AGGCGGCGAC GTGAAGGCGG GCCAGGTGCT CTACCAGATC GATCCGGCCA CCTACCAGGC TGCCTACGAC CAGGCGCGCG GCACGCTGGA AAACGCCCGC GCCACGCTGG CCTCCGCGAA GACGAAAGCG GACCGCTTCA CCGAACTCGT GAAGATCAAC GCCGTGAGCA AGCAGGACTA CGACGACGCC GTCGCCGCGG TTCGCGAAAA CGCCGCGAGC GTCACGGCCG ACGAGGCGGC GCTCGAATCC GCGCGCGTGA ACCTCGAATA CACGCACGTG CGTGCGCCCA TCTCCGGACG CATTGGCGCA TCGACCGTGA CGGAAGGCGC GCTCGTCACC TCGAACCAGA CCACCGCGCT CGCCACCATC CAGGCGTTCG ACCAGATGTA CCTCGACGTC ACGCGCCCCA GCACGGAATG GCTGAGGCTT CGCAAGGCCT TCGCTTCCGG GCGCCTGAAG AAGACGGGCA GCGACAGCGC CGCCGTCACG CTCGTGATGG AAGACGGCAC CGAATACGCC CACCCCGGCG CGCTGCAGTT CTCCGGCGTC ACGGTGGACG CCACCACGGG TTCGGTCACG CTGCGCAGCA CGTTCCCGAA CCCCGAACGC GAATTGCTGC CCGGCATGTT CGTGCGCGCC CGCCTGGAAG AAGGCGAGAA CGACAACGCG ATACTCGTGC CGCAGATGGC CGTGACGCGT GCGTCAGACG GCAAGGCGAG CGTCTACGTC GTGGATGCGG CCGGCAACGC GCGGCAGGTG CAAGTCACGG CCGACAACGC ATTCCGGGAC CAATGGATCG TGACCTCAGG CCTGCACACC GGCGACCGCG TGATCGTGAG CGGCCTGCAG AGCGTGCATG CGGGCGCGCC GGTCAAGGTG GCGGCCGATA CGCCGCAGAC GCAGGCGAAC GCGGCATCCG CGGCACCCGC GACGGACACG GCCTCGACCG TGTCGGCACA ACGCTAG
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Protein sequence | MKTPILPNHA HHPMTCRPRQ LFAALSILAI VGTAGCNRQT GAPPGGFAAQ TAQVGVLSLA PQRIVETTEL SGRLSSQKVS DVRPQVSGII LKRLFMEGGD VKAGQVLYQI DPATYQAAYD QARGTLENAR ATLASAKTKA DRFTELVKIN AVSKQDYDDA VAAVRENAAS VTADEAALES ARVNLEYTHV RAPISGRIGA STVTEGALVT SNQTTALATI QAFDQMYLDV TRPSTEWLRL RKAFASGRLK KTGSDSAAVT LVMEDGTEYA HPGALQFSGV TVDATTGSVT LRSTFPNPER ELLPGMFVRA RLEEGENDNA ILVPQMAVTR ASDGKASVYV VDAAGNARQV QVTADNAFRD QWIVTSGLHT GDRVIVSGLQ SVHAGAPVKV AADTPQTQAN AASAAPATDT ASTVSAQR
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