Gene Bcen_5542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5542 
Symbol 
ID4096557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand
Start bp61101 
End bp61967 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content69% 
IMG OID638018821 
ProductNmrA-like 
Protein accessionYP_625387 
Protein GI107028292 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0956662 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGCAA TCACAGGAAT TACCGGCAAG GTCGGCGGCG CACTGGCCCG TGAACTGCTG 
GCCTCGGGTC GGCCCGTGCG CGCGGTCGTG CGCGACGCGA CGCGGGCAGC GGCATGGGCG
GCGCGCGGGT GCGAGATCGC AACGGCTTTC ATGGAAGCCC CGGCGTTGCT CGCCGACGCA
TTCGCCGGCG CGACGGGCGT TTTCATCCTG CTGCCGCCGG TGTTCGATCC GGCGCCGGGG
TTTCCCGAAG CGCGGAAAGT GATCGAGGCC GTGTCCGCCG CGCTGCTGAA GGCGCGCCCC
GACAGGGTCG TGTGCCTGTC GACGATCGGC GCGCAGGCCG ACGAGCCCAA TCTGCTCACG
CAACTCGCGC TGATGGAGCA GGCGCTGCGC GAGATGCCGA TGCCGGTGAC GTTCCTGCGG
CCCGGCTGGT TCATGGAGAA CGCCGCGTGG GATGTCGCGT CCGCGCGCGA CGAGGGCGTC
GTCGCCAGTT ACCTGCAGCC GCTCGACAAG CCTGTGCCGA TGGTCGCCAC CGCGGACGTC
GGCCGCGTGG CGGCGCAACT GCTCCAGCAG ACGTGGCACG GTGTGCGTGT CGTCGAGCTC
GAAGGCCCGT GCCGGGTGAG CCCCAACGAT CTCGCGCTGG CCTTCGCTCG CGTGTTGGGC
CGGGACGTGC GCGCGGAAGC CGTCGACAGA CGAACGTGGG AAGCGCTGTT TCGCGCGCAG
GGCATGAAGC ATCCGCTCCC CCGCATGCGC ATGCTGGACG GCTTCAACGA AGGCTGGATC
GATTTCGAAA GTGATCCTGA AGAAATCCTG CACGGCCATG TCGCACTGGA CACGGTTCTG
GGCGAGCTCG TGTCGCGTAC GGTCTGA
 
Protein sequence
MYAITGITGK VGGALARELL ASGRPVRAVV RDATRAAAWA ARGCEIATAF MEAPALLADA 
FAGATGVFIL LPPVFDPAPG FPEARKVIEA VSAALLKARP DRVVCLSTIG AQADEPNLLT
QLALMEQALR EMPMPVTFLR PGWFMENAAW DVASARDEGV VASYLQPLDK PVPMVATADV
GRVAAQLLQQ TWHGVRVVEL EGPCRVSPND LALAFARVLG RDVRAEAVDR RTWEALFRAQ
GMKHPLPRMR MLDGFNEGWI DFESDPEEIL HGHVALDTVL GELVSRTV