Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5486 |
Symbol | |
ID | 4097269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008062 |
Strand | + |
Start bp | 5885 |
End bp | 6673 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638018765 |
Product | short chain dehydrogenase |
Protein accession | YP_625331 |
Protein GI | 107028236 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.398056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCCC TTGCTGGCAA AGTCGCGCTC GTCACCGGCG GCGCCACGCT GATCGGCGCC GCGGTCGCGC AGGACCTGAG CCGCGCCGGT GCGTGCGTCG CGATCCTCGA TCTCGATGCG GACAACGGCG CACGCGTGGC CGCGTCGCTC GGCGAACGGG CGCTGTTCAT CGCGCTCGAC ATCACCGACG ATCGTGCGAT CGAGCGCGCG ATCGCGACGA TCGTCGAGCG GTTCGGCGCG ATCGACGTGC TCGTCAATCT CGCGTGCAGC TATGTCGACG ACGGCATCCA TGCGACCCGG AACGACTGGC TCGCCGCGAT GGACGTCAAC GTCGTGTCGG CCGCGATGCT CGCGAAGGCC GTGCATCCGC ACATGGCCCG GCGCGGCGGC GGCGCGATCG TGAACTTCAG CTCGATCTCC GCACAGTGCG CGCAAACCGG CCGCTGGCTG TATCCGACCT CGAAGGCCGC GATCCGCCAG CTCACGCGCA GCATGGCGAT GGATCTCGCG CCCGATCGCA TCCGCGTCAA CTCGGTATCG CCGGGCTGGA CCTGGTCGCG CGTGATGGAC GAGATGACGC ACGGCGACCG CGCGAAGACC GATCGCGTCG CCGCGCCGTT CCACCTGCTC GGACGCGTCG GCGATCCGTC GGAAGTCGCG CAGGTCGTCA CGTTCCTGTG CAGCGACGCG GCGAGCTTCG TGACCGGCGC CGACTACGCG GTGGACGGCG GCTATGCCGC GATGGGCCCC GAACAGGCGG TGCCGGCCAT TCCGCGGCTC GCGGAGTGA
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Protein sequence | MNALAGKVAL VTGGATLIGA AVAQDLSRAG ACVAILDLDA DNGARVAASL GERALFIALD ITDDRAIERA IATIVERFGA IDVLVNLACS YVDDGIHATR NDWLAAMDVN VVSAAMLAKA VHPHMARRGG GAIVNFSSIS AQCAQTGRWL YPTSKAAIRQ LTRSMAMDLA PDRIRVNSVS PGWTWSRVMD EMTHGDRAKT DRVAAPFHLL GRVGDPSEVA QVVTFLCSDA ASFVTGADYA VDGGYAAMGP EQAVPAIPRL AE
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