Gene Bcen_5481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5481 
Symbol 
ID4094539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2786181 
End bp2788445 
Gene Length2265 bp 
Protein Length754 aa 
Translation table11 
GC content63% 
IMG OID638018760 
Productputative isoquinoline 1-oxidoreductase beta subunit 
Protein accessionYP_625326 
Protein GI107027815 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAACC ACGCCGGTGT TCCGAACGAA GACGCGGAAT CGACTGTGAG CGACAGTCCC 
TCCATCGCAA TGTCTCGCCG CAACTTTCTG GGCAGCATGG CGGCGTTCAC GCTTGCGCTC
AGCTTCCACG GAGGCACGGC CCGCGCGGCG GCCGTGATCG GAAAGTCGAC GGCACGGTTG
TCTTTCGAGC CCAATGCATT TATCCGCGTT GCCGCGGATG GCAAGGTGAC CGTGATCTCG
AGTTACCTCG AAATGGGCCA AGGGACGTTT ACGGGGCTGG CTACGCTCGC CGCCGAGGAG
CTCGACGTGA GCTTGAGTGA CATCACCGTG ACGGGGGCGC CTGCCGATGT GGAGCATTAC
ATCAATCCCG TCCTCGCGGC GCGAGGGTTC AAGGTGCAGG CGACCGGCGG CAGCACGGCG
ATGGCTGGCG CCTGGGTTCA AATGAGGCAC GCGGCAGCCA CCGCGCGGAC CATGTTCGTT
GCCGCCGCAG CCAAACGGTT CGGTGTGCCT CGGAACGAAC TCGTGGTAGA GAACGGCGTC
GTCGTCCACC CGCGTTCGGG ACGCCGGGCA ACGTACGGTA GTCTGGTGGC CGCGGCTTCC
GCGGAACCGA TCCCCAAGGA AGTCGTGCTC AAGGATCACG CCCGATTCCG ATTCATCGGC
AAGAACGGTA CGCGTCGCTT GGACGTTCCC GCCAAGGTCA ACGGTAGTGC GATCTACACG
CAGGACATTC GACTTCCGGG CATGCTCGTC GCCGCGATCG CGCATCCTCC GAAGTTGTGG
GCAAAGATAC GCAGTATCGA TAGCGCCAAG GCGCTGGCCG TCCCCGGCGT GGTCGCGGTG
GTGCGGGTTC CAGGTGACGA CGAGATTCAG GGTGGTGCGG CGGTACTTGC CCGTAACACG
TGGGCGGCCC GTCAGGGAAG GGACGCGCTG AAGATCGAGT GGGACGAGCG CGGTGCGCTG
ACCGCGGATT CTTTCATGAT CGTCGCGAAG TTTCGCGAAC TGGCCGGTAC GCCGGGCGTG
GTGGCGAAGG CGCGCGGCAA GGTGCTGGAC GGCACACCCA GCGGTGCCAA GGTGATCGAC
GCGATCTATG AGCAGCCCTA TCTGGCACAT GCGCCGATGG AGCCGCTCAA CTGCGTCGTG
CATTTGACGA AGGACCGCTG CGAAATCTGG AACGGCGAGC AATGGCACAC CGGAGATAGC
AATGCAGCCG CGAAGGAACT TGGCTTCGCG CTGAACCAGG TCCAGCTGCA TCAGCTCTAC
GCAGGGGGGA GTTTCGGCAG GCGCGCCAAT CCGCGATCGG ATTTTGTCCG CGAAGCCGTT
CGCATTGCGA TTGCTGCCCG TAAAGCGGGC ATCGACGCGC CGATAAAAAT GGTGTGGATG
CGCGAAGACG ACATGCGCGG TGTTCAATAT CGCCCGCTGA CCGTCCATCG TGTGCGTGCG
ATCGTCGATG CGTCCGGACA GCTGGCATCC TGGCACCATC GTATCGTCGG GCAGAGCTTC
ATGCCGTCGC CCGATCCCAC GACGGTCGAC GATAACCTCG TGGAAGGAGC GGCCGACACG
GGCTATGCGA TTCCGAATTT CCGGGTGGAG CAGCATAGCT ACAACGCGTT CGCGATACCC
GTGGCGTGGC TTCGGTCGGT AGGGCATACG CACACCGCGT TCGTGGTCGA GACGATGATC
GATGAACTGG CCGCGGCGGC CGGGAAAGAT CCCTATGCGT TTCGACGGCA ACTGTTGCAG
TCAAGCCCAC GCGACCTCGG TGTGCTCGAT CTCGCCGTCG AAAAGGCAGG GTGGGGCAAG
CCGCTGCCTG CATCGAAACC CGGCGACCGG CGAGCGAGAG GCATTGCCGT CCACGCGTCG
TTTGGTACGC ACGTCGCTCA GGTAGCCGAA GTCACGCTGC GCCAGGACGG CTCCTACTCC
GTAGACCGGA TCGTATGTGC CGTCGACTGC GGCACGGTGA TCAACCCTGA CATTGTTGCC
TCCCAGATCG AGGGCGCTGC CGCGCTCGGC CTTTCGTTCC TGCATCAAGC GATAACGTTC
AAGCAGGGAC AAGTCAAGGA AAGCAATTTC CACGACTATC CGATTCTGCG TATGAATGCG
ATGCCGCGAG TCGAGGTGTA CATGGTGTCG TCGACTGCCG CGCCTACGGG CATCGGCGAG
CCCGGCACGC CGCTTCCTGC GCCGGCCGTG GCGAATGCGC TTGCTGCCAT CACCGGCCGG
CGGATTCGCG CATTGCCTTT GCGTGATGAC GTGCTCGCAG CTTGA
 
Protein sequence
MTNHAGVPNE DAESTVSDSP SIAMSRRNFL GSMAAFTLAL SFHGGTARAA AVIGKSTARL 
SFEPNAFIRV AADGKVTVIS SYLEMGQGTF TGLATLAAEE LDVSLSDITV TGAPADVEHY
INPVLAARGF KVQATGGSTA MAGAWVQMRH AAATARTMFV AAAAKRFGVP RNELVVENGV
VVHPRSGRRA TYGSLVAAAS AEPIPKEVVL KDHARFRFIG KNGTRRLDVP AKVNGSAIYT
QDIRLPGMLV AAIAHPPKLW AKIRSIDSAK ALAVPGVVAV VRVPGDDEIQ GGAAVLARNT
WAARQGRDAL KIEWDERGAL TADSFMIVAK FRELAGTPGV VAKARGKVLD GTPSGAKVID
AIYEQPYLAH APMEPLNCVV HLTKDRCEIW NGEQWHTGDS NAAAKELGFA LNQVQLHQLY
AGGSFGRRAN PRSDFVREAV RIAIAARKAG IDAPIKMVWM REDDMRGVQY RPLTVHRVRA
IVDASGQLAS WHHRIVGQSF MPSPDPTTVD DNLVEGAADT GYAIPNFRVE QHSYNAFAIP
VAWLRSVGHT HTAFVVETMI DELAAAAGKD PYAFRRQLLQ SSPRDLGVLD LAVEKAGWGK
PLPASKPGDR RARGIAVHAS FGTHVAQVAE VTLRQDGSYS VDRIVCAVDC GTVINPDIVA
SQIEGAAALG LSFLHQAITF KQGQVKESNF HDYPILRMNA MPRVEVYMVS STAAPTGIGE
PGTPLPAPAV ANALAAITGR RIRALPLRDD VLAA