Gene Bcen_5350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5350 
Symbol 
ID4095298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2653505 
End bp2654824 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content71% 
IMG OID638018630 
Productmajor facilitator transporter 
Protein accessionYP_625196 
Protein GI107027685 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTCGA CCCTTTCGAC CCACCCGGCC GCCGTCGACG ACGGCGCGAC GCAGGCGCTC 
TATCGCCGGA TCTCGCGCCG GCTGCTGCCG TTCCTGATCC TGTGCTACAC GCTGTCGTTC
ATCGACCGGA TCAACATCGG CTTCGCGCAC GCGCAGATGG CCGCCGAACT GCACTTCTCC
GACGCCGTCT ACGGGCTCGG CGCGGGCATC TTCTTCATCG GCTACATGGC GTTCGAGATT
CCGAGCAACG CGTGGCTCGC GCGAATCGGC GCGCGCCGGA CGATTGCCCG GATCATGGTG
CTGTGGGGCC TCGGCTCGGC CGCGACGATG TTCGTCACGA CGCCCGCGCA GTTCTACGCG
TGCCGCTTCC TGCTGGGCGT GTTCGAGGCC GGCTTCTTCC CCGGCATCCT GTTCTATCTC
GGCGCGTGGT ATCCGCCGCG GCAGCGCGCC AAGGCGTTCG CGCTGTTCAT GACCGCGCTG
TATCTCGCGG GGTTGATCGC CGGCCCCGTG TCGGGCGCGA TCCTGTCGTA CTTCGACGGC
GTGGGCGGCC TGAGCGGCTG GCAATGGCTG TTCGTCGTCG AAGGGCTGCC GAGCAGCGCG
CTCGGCCTCG TCGCACTGCG CTTTCTCGAC GACCGGCCGG ACGACGCCCG CTGGCTGTCG
GACGCCGACA AGGCCGCGCT GCGCGCCGCC CACGCGCAGG CCGAAGCCGA TACGCCGGCC
GCGAACGCGG CGCGGCCGTT GCTCGCGCAT CGCGATTTCT GGCTGCTGTG CGCGGCCAAT
TTCGCGATCG CGGCCGCCGG CTACGCGCTC GTGTTCTGGA TGCCCGTGAT CCTGCATCGC
GGCGGCCTGC ATGGCGCGAT GCAGATCGGA CTGCTGTCCG CACTGCCGTA CCTGTGCGGC
ATCGTCGGCA TGCTCGCGAT GGGCTGGCGC ACCGAGCGCC GGCGCGAATG GCGCAAGCAC
GGCGCCGTCG CGATGCTCGC GTGCGCGGCG GCGCTCGCCG GCCTCGCGAG CAGCGCCGGC
ACGTCGCATC TGATGATCGC GCTGTGCATC GCGGTCGCCA CGCACGCCGC GGCACTGCCC
GCGTTCTGGG TGCTGCCGGG GCTCGCGCTG CCGAAGCGCT CGATGGCGGT CGCGATCGCG
GCGATCACGA TGACCGGCGC GATCGGCGGA TTCGCGAGCC CGTTCCTGAT GGGCGTGCTC
AACACGGCCA CCGGATCGAT GCGCGGCGGC CTCTATTTCA ATGCCGCGCT GCTGGCGGCC
GGCGCGCTCG CGTTGCTCGG CACGCTGCGC GCCCGCGCGG CGCACGCGAA CGCCGGCTGA
 
Protein sequence
MASTLSTHPA AVDDGATQAL YRRISRRLLP FLILCYTLSF IDRINIGFAH AQMAAELHFS 
DAVYGLGAGI FFIGYMAFEI PSNAWLARIG ARRTIARIMV LWGLGSAATM FVTTPAQFYA
CRFLLGVFEA GFFPGILFYL GAWYPPRQRA KAFALFMTAL YLAGLIAGPV SGAILSYFDG
VGGLSGWQWL FVVEGLPSSA LGLVALRFLD DRPDDARWLS DADKAALRAA HAQAEADTPA
ANAARPLLAH RDFWLLCAAN FAIAAAGYAL VFWMPVILHR GGLHGAMQIG LLSALPYLCG
IVGMLAMGWR TERRREWRKH GAVAMLACAA ALAGLASSAG TSHLMIALCI AVATHAAALP
AFWVLPGLAL PKRSMAVAIA AITMTGAIGG FASPFLMGVL NTATGSMRGG LYFNAALLAA
GALALLGTLR ARAAHANAG