Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5344 |
Symbol | prpB |
ID | 4095292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 2645280 |
End bp | 2646173 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638018625 |
Product | 2-methylisocitrate lyase |
Protein accession | YP_625191 |
Protein GI | 107027680 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0562563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAATA CGCATCTTCA GAGCGCCGGC GCGAAGTTCC GCGCGGCAGT CGCGGCCGAG CAGCCGCTGC AGGTGGTCGG CGCGATCACC GCGTACGCGG CCAAGATGGC GCAGGCCGTC GGCTTCAAGG CCGTGTACCT GTCGGGCGGC GGCGTCGCGG CGAACTCGCT CGGCATTCCC GACCTCGGCA TCAGCACGAT GGAAGACGTG CTGATCGACG CGACCCGGAT CACCAACGCG ACCGATCTGC CGCTGCTGGT CGACATCGAC ACGGGCTGGG GCGGCGCGTT CAACATCGCG CGCACGGTCC GCTCGTTCAT CAACGCCGGC GTCGCGGCCG TGCACCTCGA GGACCAGGTC GGCCAGAAGC GCTGCGGCCA CCGCCCGGGC AAGGAAGTCG TGCCGATCGA CGAAATGGTC GATCGCGTGA AGGCCGCGGT CGATGCGCGT ACCGACGACC AGTTCGTGAT CATGGCGCGC ACCGACGCGG CCGCCGCGGA AGGGATCGAC TCGGCGATCG AGCGCGCGGT CGCGTACGTC GAAGCCGGCG CGGACATGAT CTTCCCGGAA GCGATGAAGA CGCTCGACGA CTACCGCCGC TTCAAGGCCG CCGTGAAGGT GCCGATCCTC GCGAACCTGA CCGAGTTCGG CTCGACGCCG CTGTTCACCG TCGACGAACT GCGCGAGGCG AACGTCGACA TCGCGCTGTA CTGCTGCGGC GCGTATCGTG CGATGAACAA GGCCGCGCTG AACTTCTACG AGACGCTGCG CCGCGACGGC ACGCAGAAGG CGGCCGTACC GACAATGCAG ACGCGCGCCG AGCTGTACGA CTTCCTCGGC TATCACGAAT ACGAGCGCAA GCTCGACGAA CTGTTCGCGC AGGGCAAGAA GTAA
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Protein sequence | MSNTHLQSAG AKFRAAVAAE QPLQVVGAIT AYAAKMAQAV GFKAVYLSGG GVAANSLGIP DLGISTMEDV LIDATRITNA TDLPLLVDID TGWGGAFNIA RTVRSFINAG VAAVHLEDQV GQKRCGHRPG KEVVPIDEMV DRVKAAVDAR TDDQFVIMAR TDAAAAEGID SAIERAVAYV EAGADMIFPE AMKTLDDYRR FKAAVKVPIL ANLTEFGSTP LFTVDELREA NVDIALYCCG AYRAMNKAAL NFYETLRRDG TQKAAVPTMQ TRAELYDFLG YHEYERKLDE LFAQGKK
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