| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5343 |
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| Symbol | |
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| ID | 4095291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008061 |
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| Strand | - |
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| Start bp | 2643121 |
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| End bp | 2645109 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638018624 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_625190 |
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| Protein GI | 107027679 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02329] propionate catabolism operon regulatory protein PrpR |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTCT CCTCGACCAA GGCCGTCGGC CCGGCCGACC GCGCCGTGCG CCCGCGCATC
TGGGCGATGG GCATCAGCCG GCTGCGCGAG CTGTTTCGCG AGATCGCCGG CGAATTCGAC
GAACGCGCCG ACGTGCGGAT CGTCACGCGC GCCTACGAAG ATGCGCTGAG CGCGATCGCC
GAGGCCGGCA CCGCGCGCCC CGACGTGATC GTCGCGGCCG GCTCGAACGG CGGCTTCCTG
AAAACGCGTG CGCAGGTGCC GGTGGTGGTC GTGTCGCCCA CCGGCTTCGA CGTGATGCAG
GCGCTGGCGC GCGCGCGGCG CGACGCAGCG CGGATCGCGC TCGTGAGCGC CGGGGAAACG
CCGCCCGAGG TGCGCCGCTT CGTCGCCGCG TACGGCCTCG ACGTGCAGTT TGCGTCATAT
CAGTCCGCCC AGGAAGCGGA GGCCTGCGTG CACGACCTGC GCGATCGCGG CATCGAGACG
ATCGTCGGCC CGGGCCTCGT CACCGATCTC GCGGCCAGCG TCGGCATGGG CGCGGTGTTC
CTGTATTCGC ATGCGTCGGT GCGCAAGGCC GTCGAGACGG CGCTCGAAGT CGCGTATGCG
ACGCACGCCG AGGCGTTCCG CCGCCAGCGG CTCGATACCC TGCTGCAACA TCTGCGCGAC
GGCGTGGTCG CGCTCGACGC GCACGGCCGC GTCGAAGCGA TCAACCAACG GCTCGCGTCG
GCGCTCGGGG TCGAACCCGC GGCGGCCGTC GGCCGCGCGC TCGTCGATCT GCGTCCCGAG
TTGCGCACGC TACGCGGCGA GGACGGCGAC GCGCTCGCGA CCGTGCGCGG CGTGCGTTAC
GTCGTGCATC GCGGGCCGCT GGTCGATCGC GGCGTCACGT CGGGCAGCGT GCTCACGTTC
CAGGAATCGC GCGCGGTCGA ACGGCTCGAT CGCGCGTTGC GTTCGCAACC GACCACGCAG
CAGTTCGCCG CCCGTTACGC GCTCGACGAC GTGGTCGGCG CCTCGGCGCC GATGACGCGC
GTGCGCGAGC TCGTGCGCCG CTACGCGAAA TCCGATGCGA CCGTGCTCGT GCTCGGCGAG
AGCGGCACCG GCAAGGAGAT GATCGCGCAG AGCCTGCATG CGCTGTCCGC GCGGCGCAGC
TATCCGTTCG TCGCGGTCAA CTGCGGCGCG TTTCCCGAAG CGCTGCTCGA GAGCGAACTG
TTCGGCTATG AGGAAGGCGC GTTCACCGGC GCGCGACGCG GCGGCAAGAC CGGCCTGTTC
GAGGCCGCGC ACCGCGGCAC GCTGTTTCTC GACGAGATCG GCGAGATGCC GCCGTCGCTG
CAAAGCAGGC TGCTGCGCGT GCTGCAGGAG CGCGAGGTGA TTCGCCTCGG CTCGACCGAG
CCGATCCGCA TCGACGTGCG CGTGATCGCC GCGACGCACC GGCCGCTGCT CGCCGCCGTC
GAGGCCGGCA CGTTCCGCGC GGATCTCTAT TACCGGCTCA ACATCCTGAA CATCGGCCTG
CCGCCGCTGC GCGAGCGCGC GGCCGACATT CCCGCGCTCG CGGCGACACT GCTCGTGCAG
GCCGCGCGGC GCGAGCCGCG GCTCGCCGAA CGCGTGCGCG ACACCGACGA CGCGCTGCGC
GTGCTCGACG CGACGCAAGC GACGCTCGCG CGCTACCGCT GGCCCGGCAA CGTGCGCGAA
CTGCAGAACG TGGTCGAGCG GATCGCGGTG GAGCTGGCGG AGGCAGTCGA CGAAAGCGAT
CCGGGCGCCG CGTGCGCGGC GCTTGCCCCC GGTGCGCTGC ACGTGATCGC GCCCGAGCTG
TTCGCCGCGC CGCTCGATGC GGCCGGCGCC GCCGACGACG ATGCGCAGAC GCTGCAGGCG
CGCCGCCGTC GCGCGGAAGC CGACGAGATC CGCGCGGTAC TCGACGCATG CGGCGGCGAC
CGCGACCGCG CGTGCGCGAT GCTCGGCATC AGCAAGACGA CGCTATGGCG GAAGTTGTCG
GCGAAATAG
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| Protein sequence | MDLSSTKAVG PADRAVRPRI WAMGISRLRE LFREIAGEFD ERADVRIVTR AYEDALSAIA
EAGTARPDVI VAAGSNGGFL KTRAQVPVVV VSPTGFDVMQ ALARARRDAA RIALVSAGET
PPEVRRFVAA YGLDVQFASY QSAQEAEACV HDLRDRGIET IVGPGLVTDL AASVGMGAVF
LYSHASVRKA VETALEVAYA THAEAFRRQR LDTLLQHLRD GVVALDAHGR VEAINQRLAS
ALGVEPAAAV GRALVDLRPE LRTLRGEDGD ALATVRGVRY VVHRGPLVDR GVTSGSVLTF
QESRAVERLD RALRSQPTTQ QFAARYALDD VVGASAPMTR VRELVRRYAK SDATVLVLGE
SGTGKEMIAQ SLHALSARRS YPFVAVNCGA FPEALLESEL FGYEEGAFTG ARRGGKTGLF
EAAHRGTLFL DEIGEMPPSL QSRLLRVLQE REVIRLGSTE PIRIDVRVIA ATHRPLLAAV
EAGTFRADLY YRLNILNIGL PPLRERAADI PALAATLLVQ AARREPRLAE RVRDTDDALR
VLDATQATLA RYRWPGNVRE LQNVVERIAV ELAEAVDESD PGAACAALAP GALHVIAPEL
FAAPLDAAGA ADDDAQTLQA RRRRAEADEI RAVLDACGGD RDRACAMLGI SKTTLWRKLS
AK
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