Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5298 |
Symbol | |
ID | 4094584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 2595548 |
End bp | 2597626 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638018579 |
Product | carbon starvation protein CstA |
Protein accession | YP_625145 |
Protein GI | 107027634 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.884841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGGG CTTCCAGTAC CCTGCTATGG ATCGCGGTCG CGCTGCTTGG CGCGTTCGCA TTCGGCACGA TCGCACTCGC GCACGGCGAG CGCGTCAGTG CCCTCTGGAT CGTGATCGCC GCAGTCTGCG TGTATCTGAT CGCGTATCGC TTCTACAGCC GTTTCATCGC CAGCAAGGTC ATGCAGCTCG ACGGGCTGCG GATGACGCCG GCGGTCAAGT ACAACGACGG CCTCGACTAC GTGCCGACCA ACAAGTACGT GCTGTTCGGC CATCACTTCG CCGCGATCGC CGGCGCCGGG CCGCTGGTCG GCCCCGTGCT CGCCGCGCAG ATGGGCTACA CGCCCGGCAT GCTGTGGATT CTGGCCGGCG TCGTGTTCGC CGGCGCGGTG CAGGATTTCA TCGTGCTGTT CATCTCGACG CGTCGCGACG GCCGTTCGCT CGGCGACCTC GTCAAGATGG AGCTCGGCAC GGTGCCCGGC GTGATCGCGC TGTTCGGCGC GTTCCTGATC ATGGTGATCA TCCTCGCGGT GCTCGCGCTG ATCGTCGTGA AGGCGCTGAC CAATTCGCCG TGGGGCACGT TCACCGTCGC CGCGACGATT CCGATCGCGC TGTTCATGGG CGTCTATACG CGCTACATCC GTCCGGGCCG CATCGGCGAA GTGTCGATCA TCGGCTTCAT CGGGCTGATG GCGGCGATCG CGTTCGGCCA GAACGTGGCC GCCTCGCCGG CGGTTGCCGC GTGGTTCACG TTCAGCGGCA CGCAGCTCAC GTGGATCCTG ATCGGCTACG GCTTCGTCGC ATCGGTGCTG CCGGTGTGGC TGCTGCTCGC GCCGCGCGAC TACCTGTCGA CGTTCCTGAA GATCGGCACG ATCCTCGGCC TCGCGATCGG CATCCTGGTC GTCGCACCGG AACTGAAGAT GCCCGCGCTG ACGAAGTTCG TCGACGGCTC GGGCCCGGTG TGGTCGGGCA ACCTGTTCCC GTTCCTGTTC ATCACGATCG CGTGCGGCGC GGTGTCGGGC TTCCACGCGC TGATCTCGTC GGGCACGACG CCGAAGCTGA TCGACAACGA AACCAATGCG CGCTTCATCG GTTACGGCGC GATGCTGATG GAATCGTTCG TCGCGATCAT GGCGCTGGTC GCCGCGTGCG TGATCGAACC GGGCATCTAC TTCGCGATGA ACGCGCCGGC CGCGGTGCTC GGCTCGACGC CGGAAGCGGT CGCGAACACC GTCACGCAAT GGGGCTTCGT GCTGACGCCC GACATGCTGA CGCAGACGGC CAAGGCCGTC GGCGAAACGA CGATCATCGC GCGTGCGGGC GGCGCGCCGA CGCTGGCCGT CGGCATGGCG CACATCCTGC ACCAGGTGAT CGGCGGCGAA GCGATGATGG CGTTCTGGTA TCACTTCGCG ATCCTGTTCG AGGCGCTGTT CATCCTGACG GCCGTCGACG CGGGCACGCG TGCGGGCCGC TTCATGCTGC AGGATCTGCT CGGCACGTTC CACCCGGCGC TCAAGCGCAC CGAGTCGCTG CCCGCGAACC TCGTCGCCAC CGCGCTGTGC GTGGCCGCGT GGGGCTACTT CCTGTACCAG GGCGTGGTCG ATCCGCTCGG CGGCATCAAC ACGCTGTGGC CGCTGTTCGG CATCTCGAAC CAGATGCTCG CCGCGATCGC GCTGGTGCTC GGCACCGTCG TGCTGTTCAA GATGAAGCGC GAGCGCTATG CGTGGGTCAC GATGGTGCCG ACCGCATGGC TCTTGATTTG CACGCTGACG GCCGGCTGGC AGAAGATTTT CGACGCGAAC CCGAAGGTCA GCTTCCTCGC GCACGCCGCG AAGCTGCAGG CCGCGGTGGA CGAAGGCAAG GTGCTCGCGC CGGCGAAGTC GATCGCGCAG ATGAAACGGA TCATCTTCAA CGACTACATC GATGCGGCGC TGGCCGGGCT GTTCATCTTC GTCGTCGTGG CCATCGCGGT GTACGGCGTG ATCGCCGTGC TGCGCGCGCG CCGCGAGTCG AAGCCGACCG TGCGCGAGAC GCCGTACGAA GCGATGCCGG CCGCGCAGGC GCTCGGCAGC GGACGTTGA
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Protein sequence | MNRASSTLLW IAVALLGAFA FGTIALAHGE RVSALWIVIA AVCVYLIAYR FYSRFIASKV MQLDGLRMTP AVKYNDGLDY VPTNKYVLFG HHFAAIAGAG PLVGPVLAAQ MGYTPGMLWI LAGVVFAGAV QDFIVLFIST RRDGRSLGDL VKMELGTVPG VIALFGAFLI MVIILAVLAL IVVKALTNSP WGTFTVAATI PIALFMGVYT RYIRPGRIGE VSIIGFIGLM AAIAFGQNVA ASPAVAAWFT FSGTQLTWIL IGYGFVASVL PVWLLLAPRD YLSTFLKIGT ILGLAIGILV VAPELKMPAL TKFVDGSGPV WSGNLFPFLF ITIACGAVSG FHALISSGTT PKLIDNETNA RFIGYGAMLM ESFVAIMALV AACVIEPGIY FAMNAPAAVL GSTPEAVANT VTQWGFVLTP DMLTQTAKAV GETTIIARAG GAPTLAVGMA HILHQVIGGE AMMAFWYHFA ILFEALFILT AVDAGTRAGR FMLQDLLGTF HPALKRTESL PANLVATALC VAAWGYFLYQ GVVDPLGGIN TLWPLFGISN QMLAAIALVL GTVVLFKMKR ERYAWVTMVP TAWLLICTLT AGWQKIFDAN PKVSFLAHAA KLQAAVDEGK VLAPAKSIAQ MKRIIFNDYI DAALAGLFIF VVVAIAVYGV IAVLRARRES KPTVRETPYE AMPAAQALGS GR
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