Gene Bcen_5298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5298 
Symbol 
ID4094584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2595548 
End bp2597626 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content66% 
IMG OID638018579 
Productcarbon starvation protein CstA 
Protein accessionYP_625145 
Protein GI107027634 
COG category[T] Signal transduction mechanisms 
COG ID[COG1966] Carbon starvation protein, predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.884841 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGGG CTTCCAGTAC CCTGCTATGG ATCGCGGTCG CGCTGCTTGG CGCGTTCGCA 
TTCGGCACGA TCGCACTCGC GCACGGCGAG CGCGTCAGTG CCCTCTGGAT CGTGATCGCC
GCAGTCTGCG TGTATCTGAT CGCGTATCGC TTCTACAGCC GTTTCATCGC CAGCAAGGTC
ATGCAGCTCG ACGGGCTGCG GATGACGCCG GCGGTCAAGT ACAACGACGG CCTCGACTAC
GTGCCGACCA ACAAGTACGT GCTGTTCGGC CATCACTTCG CCGCGATCGC CGGCGCCGGG
CCGCTGGTCG GCCCCGTGCT CGCCGCGCAG ATGGGCTACA CGCCCGGCAT GCTGTGGATT
CTGGCCGGCG TCGTGTTCGC CGGCGCGGTG CAGGATTTCA TCGTGCTGTT CATCTCGACG
CGTCGCGACG GCCGTTCGCT CGGCGACCTC GTCAAGATGG AGCTCGGCAC GGTGCCCGGC
GTGATCGCGC TGTTCGGCGC GTTCCTGATC ATGGTGATCA TCCTCGCGGT GCTCGCGCTG
ATCGTCGTGA AGGCGCTGAC CAATTCGCCG TGGGGCACGT TCACCGTCGC CGCGACGATT
CCGATCGCGC TGTTCATGGG CGTCTATACG CGCTACATCC GTCCGGGCCG CATCGGCGAA
GTGTCGATCA TCGGCTTCAT CGGGCTGATG GCGGCGATCG CGTTCGGCCA GAACGTGGCC
GCCTCGCCGG CGGTTGCCGC GTGGTTCACG TTCAGCGGCA CGCAGCTCAC GTGGATCCTG
ATCGGCTACG GCTTCGTCGC ATCGGTGCTG CCGGTGTGGC TGCTGCTCGC GCCGCGCGAC
TACCTGTCGA CGTTCCTGAA GATCGGCACG ATCCTCGGCC TCGCGATCGG CATCCTGGTC
GTCGCACCGG AACTGAAGAT GCCCGCGCTG ACGAAGTTCG TCGACGGCTC GGGCCCGGTG
TGGTCGGGCA ACCTGTTCCC GTTCCTGTTC ATCACGATCG CGTGCGGCGC GGTGTCGGGC
TTCCACGCGC TGATCTCGTC GGGCACGACG CCGAAGCTGA TCGACAACGA AACCAATGCG
CGCTTCATCG GTTACGGCGC GATGCTGATG GAATCGTTCG TCGCGATCAT GGCGCTGGTC
GCCGCGTGCG TGATCGAACC GGGCATCTAC TTCGCGATGA ACGCGCCGGC CGCGGTGCTC
GGCTCGACGC CGGAAGCGGT CGCGAACACC GTCACGCAAT GGGGCTTCGT GCTGACGCCC
GACATGCTGA CGCAGACGGC CAAGGCCGTC GGCGAAACGA CGATCATCGC GCGTGCGGGC
GGCGCGCCGA CGCTGGCCGT CGGCATGGCG CACATCCTGC ACCAGGTGAT CGGCGGCGAA
GCGATGATGG CGTTCTGGTA TCACTTCGCG ATCCTGTTCG AGGCGCTGTT CATCCTGACG
GCCGTCGACG CGGGCACGCG TGCGGGCCGC TTCATGCTGC AGGATCTGCT CGGCACGTTC
CACCCGGCGC TCAAGCGCAC CGAGTCGCTG CCCGCGAACC TCGTCGCCAC CGCGCTGTGC
GTGGCCGCGT GGGGCTACTT CCTGTACCAG GGCGTGGTCG ATCCGCTCGG CGGCATCAAC
ACGCTGTGGC CGCTGTTCGG CATCTCGAAC CAGATGCTCG CCGCGATCGC GCTGGTGCTC
GGCACCGTCG TGCTGTTCAA GATGAAGCGC GAGCGCTATG CGTGGGTCAC GATGGTGCCG
ACCGCATGGC TCTTGATTTG CACGCTGACG GCCGGCTGGC AGAAGATTTT CGACGCGAAC
CCGAAGGTCA GCTTCCTCGC GCACGCCGCG AAGCTGCAGG CCGCGGTGGA CGAAGGCAAG
GTGCTCGCGC CGGCGAAGTC GATCGCGCAG ATGAAACGGA TCATCTTCAA CGACTACATC
GATGCGGCGC TGGCCGGGCT GTTCATCTTC GTCGTCGTGG CCATCGCGGT GTACGGCGTG
ATCGCCGTGC TGCGCGCGCG CCGCGAGTCG AAGCCGACCG TGCGCGAGAC GCCGTACGAA
GCGATGCCGG CCGCGCAGGC GCTCGGCAGC GGACGTTGA
 
Protein sequence
MNRASSTLLW IAVALLGAFA FGTIALAHGE RVSALWIVIA AVCVYLIAYR FYSRFIASKV 
MQLDGLRMTP AVKYNDGLDY VPTNKYVLFG HHFAAIAGAG PLVGPVLAAQ MGYTPGMLWI
LAGVVFAGAV QDFIVLFIST RRDGRSLGDL VKMELGTVPG VIALFGAFLI MVIILAVLAL
IVVKALTNSP WGTFTVAATI PIALFMGVYT RYIRPGRIGE VSIIGFIGLM AAIAFGQNVA
ASPAVAAWFT FSGTQLTWIL IGYGFVASVL PVWLLLAPRD YLSTFLKIGT ILGLAIGILV
VAPELKMPAL TKFVDGSGPV WSGNLFPFLF ITIACGAVSG FHALISSGTT PKLIDNETNA
RFIGYGAMLM ESFVAIMALV AACVIEPGIY FAMNAPAAVL GSTPEAVANT VTQWGFVLTP
DMLTQTAKAV GETTIIARAG GAPTLAVGMA HILHQVIGGE AMMAFWYHFA ILFEALFILT
AVDAGTRAGR FMLQDLLGTF HPALKRTESL PANLVATALC VAAWGYFLYQ GVVDPLGGIN
TLWPLFGISN QMLAAIALVL GTVVLFKMKR ERYAWVTMVP TAWLLICTLT AGWQKIFDAN
PKVSFLAHAA KLQAAVDEGK VLAPAKSIAQ MKRIIFNDYI DAALAGLFIF VVVAIAVYGV
IAVLRARRES KPTVRETPYE AMPAAQALGS GR