Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5284 |
Symbol | |
ID | 4094803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 2582518 |
End bp | 2584593 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638018565 |
Product | transketolase |
Protein accession | YP_625131 |
Protein GI | 107027620 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTCAA CCGATTTCCC GTCAATCCAA GGGGCGGCAC TCGATGCGCT GTGCATCAAT ACGCTGCGCT TCCTGTCGAT CGATGCCGTG CAGAAAGCGG CGAGCGGCCA TCCAGGCCTG CCGCTCGGCG CCGCGCCGAT GGCCTATGCG CTATGGATGC GTCATCTCAA GCATCACCCG GCCAATCCGG CATGGTTCGA TCGCGATCGC TTCATCCTGT CGGCCGGACA TGGATCGATG CTGTTGTACA GCCTGCTCCA CCTCACCGGC TACGACCTGC CGCTCGATCA GATCGGCCGC TTCCGGCAAT CGGGCAGCCT CACGCCCGGC CATCCGGAGC GCGGCCTCAC TCCGGGTGTC GAGACGACGA CCGGCCCGCT CGGCCAGGGT TTCGCCAACG CCGTCGGCAT GGCGATGGCG GAAACGCAGC TCGCCGCGTG CTACAACCGT CCCGGCTTCG AGATCGTGGA TCACCGCACC TACGCACTCG TCAGCGACGG CGACCTGATG GAAGGCGTCG CGGCGGAAGC GGCATCGCTT GCCGGCCATC TCCAGCTCGG TAAGCTGATC TGCCTGTACG ACGATAATCG CGTCACGCTG TCCGCCGGCA CCGCGATCAC CTTCACCGAA GATCGCGCAC AACGGTTCGA CGCCTACGGC TGGCATACCG AAACGGTCGA AGACGGCAAC GACCTGGCCG CCATCGATGC GGCGCTGGTC AACGCACGCG CCGAGCAGCG ACGTCCGTCG TTGATCCTCG TGCGCACGCA TCTCGGCTAT GGCTCGCCCA ACCGGCAAGA CACGTACCAG GCTCACGGAT CGCCACTCGG CGATGCCGAG GTGCGCCTGA CCAAGCACAA CCTCGGCTGG CCGCCCGATC CCGCGTTTCA TATTCCCCCA CCGGCGCTCG CGCATTTTCG CCGGGCGCTG GCGGAGGGGC GAGTACGGGA AGAGCAGTGG AACGCGCGGT TCGAGGCCTA TACGCGCGCG TTCCCCGAGC TGGCTCGGAT GCTGCTGAAC ACTGTGCACG GCAAGCTGCC CGACGGTTGG GACCGCGATA TCCCGGTCTT TCCGGCCGAT CCGAAAGGCA TGGCGACGCG GGTCGCATCC GGCAAGGTGT TGAACGCCCT CGCCTCCCGC GTCCCGTCGC TGGTCGGCGG CTCCGCCGAC CTAAACCCCT CCACCTTCAC CGCGCTAATC GGGCTCGGCG ATTTCGAGGC CGCCGGCGTG AACGCGCTCG ACCGACAAGG GTCCGACGGC GGCGGCTGGA GCCGTAGCGG CCGCAATCTG CATTTCGGCG TGCGCGAGCA TGCGATGGGC GCGATCCTGA ACGGCTTGGC GGCCCACGGC GGCATCCGGC CATTCGGCGC GACCTTTCTG ATCTTTTCCG ACTACATGCG TCCGCCGATC CGGCTCGCCG CATTGATGCG TCTGCAGGTG ATCTACGTGT TCACGCACGA CAGTCTCGCC GTCGGCGAGG ACGGTGCGAC ACATCAGCCG ATGGAGCAGC TTGCCGGACT GCGTGCGGTC CCGGGCCTGC TGGTGATTCG ACCGGCCGAT GCCAATGAAA CCGCCGTCGC GTGGCGTGTG GCGCTCGAAG CGCGGGAGCG ACCGACTGCG CTGGTACTGA CCCGCCAGGA CGTGCCGACC ATCGATCGCC TCCGGTTCGC GCCGGCCGAG GGCTTGCGGC GTGGCGGCTA CGTCTTGGCC GATGCCCCCG ATGGCCACCC CACGCTGATC CTGATCGCGA CGGGCTCGGA AGTCACGCTC GCGCTGGCGG CACAAGTCGA ATTGCTCGCG CGCGGCGTAG CGGTTCGGGT GGTGTCGCTG CCCTGTTGGA GATTATTCGA CGCTCAGCCC CAGCCATATC AGGACGCCGT GCTGCCGAAG TCGGTCGGCG CGCGGCTGGC GATCGAAGCG GGTGTGTCAC AAGGCTGGCA CCGCTATGTC GGCGATCGTG GCGACGTACT CGGCATCGCG GGTTTCGGCG CGTCGGCGCC GGGCGCCGAG CTGATGCGAG ATTTCGGCTT CACGGTCGAG AACGTCTGCG ACCACGCACT GAAACTGCTC GCCTGA
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Protein sequence | MTSTDFPSIQ GAALDALCIN TLRFLSIDAV QKAASGHPGL PLGAAPMAYA LWMRHLKHHP ANPAWFDRDR FILSAGHGSM LLYSLLHLTG YDLPLDQIGR FRQSGSLTPG HPERGLTPGV ETTTGPLGQG FANAVGMAMA ETQLAACYNR PGFEIVDHRT YALVSDGDLM EGVAAEAASL AGHLQLGKLI CLYDDNRVTL SAGTAITFTE DRAQRFDAYG WHTETVEDGN DLAAIDAALV NARAEQRRPS LILVRTHLGY GSPNRQDTYQ AHGSPLGDAE VRLTKHNLGW PPDPAFHIPP PALAHFRRAL AEGRVREEQW NARFEAYTRA FPELARMLLN TVHGKLPDGW DRDIPVFPAD PKGMATRVAS GKVLNALASR VPSLVGGSAD LNPSTFTALI GLGDFEAAGV NALDRQGSDG GGWSRSGRNL HFGVREHAMG AILNGLAAHG GIRPFGATFL IFSDYMRPPI RLAALMRLQV IYVFTHDSLA VGEDGATHQP MEQLAGLRAV PGLLVIRPAD ANETAVAWRV ALEARERPTA LVLTRQDVPT IDRLRFAPAE GLRRGGYVLA DAPDGHPTLI LIATGSEVTL ALAAQVELLA RGVAVRVVSL PCWRLFDAQP QPYQDAVLPK SVGARLAIEA GVSQGWHRYV GDRGDVLGIA GFGASAPGAE LMRDFGFTVE NVCDHALKLL A
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