Gene Bcen_5258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5258 
Symbol 
ID4094933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand- 
Start bp2551931 
End bp2552410 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content65% 
IMG OID638018539 
Productalkylhydroperoxidase AhpD core 
Protein accessionYP_625105 
Protein GI107027594 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAGC GTATCAACTA CATTCAACAG TCACCCGAGT TGTTCAGGAA ATTCCTCGAG 
CTCAGCAACC TGCTGCGCAG CAGCGCGATC GAGGAATCGA TCCGGGATCT CGTGTCCCTC 
CGGGCATCCC AGATCAACGG CTGCGCGTTC TGCGTCGACA TGCACGTGAA GGAGGCACGC 
ATCCACGGCG AGCGCGAGCT GCGCCTGCAT CATCTGGCGA CGTGGCGCGA ATCGACGCTC 
TTCTCGCCGC GCGAGCGGGC CGCGTTGGCC TGGACGGAAG CGCTGACGAC GCTGCCCGCG 
CACGGCGTGC CGGACGACCT CTACGACCGC GTGCGCGGCC AGCTCTCCGA GAAGGAATTG 
TCGGACCTGA CGTTCGAAGT GATGGCGATC AACGGCTGGA ACCGCGCGAA TGTCGCGTTC 
CGGACCGTGC CGGGCTCGTC CGACAAGGCG TTCGGCCTCG ACAAGGCCAA TCTCGCCTGA
 
Protein sequence
MTQRINYIQQ SPELFRKFLE LSNLLRSSAI EESIRDLVSL RASQINGCAF CVDMHVKEAR 
IHGERELRLH HLATWRESTL FSPRERAALA WTEALTTLPA HGVPDDLYDR VRGQLSEKEL 
SDLTFEVMAI NGWNRANVAF RTVPGSSDKA FGLDKANLA