Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5210 |
Symbol | |
ID | 4095041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 2503040 |
End bp | 2503978 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638018491 |
Product | outer membrane protein (porin) |
Protein accession | YP_625057 |
Protein GI | 107027546 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00719172 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGAA TCATCGTGGT TTCGGCGTTG GCATGCGTTG CAGCAGACGC GGTCGCGCAA TCGAGCGTGA CGTTGTTCGG TTACATCGGC GCGGGCGTGC GCTGGACCGA TGGCGTGAAA GGGGGGAGTC AGATCGGGTT CGACAACAAC GCGATATCGG GCAACATTTT CGGCATCAAG GGCGCCGAGG ATCTCGGCGG CGGCATGCAG GCGATCTTCA TGCTGCAGAG CGGGTTCCTG ACGGGCACCG GTGCGCTGGC GAAATCGCCC GGCCTGCTGT TCTCGCAGAT GGCTTATGTC GGCCTGAGCG GCCCATACGG CCGCGTCACG TTCGGACGGC AACTGAACGC GCTCGAGGAC ATCGGCATTG CGCTCGACCC GAATTCCGCG CAAGGGCAGT CGCTGTCGAC GATCCCCGGC GTGGTGTGGG GCGGCAACTT CTTCACGAAC GATTCGCGCT TCAACAACAC GATCAAGTAC GTCGGCACGT TCGGCGGCGC GACCGTGCGC GGCAGCTATT CGCCCGGCGG GGTCGCCGGC AATCAGCGCG CCGGCTCGAA CGTTGCCGTC GGCACGAGCT ACCGGTTCCG GACGCTGTTG CTCGGCGCCG CCTATCAGAC GACCTGGAAC GCCGACGCAT CGCAATGGGC GCGCACGATC ATGGGCGGTG CGACCTGGCA GGTCGGCCCG GCCCGGCTCT ACCTGAGCTA CAGCGATCTC GCCGTCAGCG CCGCGAAGGC CGGCGCGCCG GAGCGGCGCG ACCGGATTCC GGCGGTCGGG ATCGTCTATC AGGTCACGCC GTTCCTGCAA TTGTCCGGCG CGACCTATTA CGACTTCGCG CAGAACCTGA AGAACACCGG CGGTGCGGAC GGCCGCAAGC TGACGTCGTA CGCGATGCTG CAGTACTTCC TGTCGAAGCG GACCAGCCTG TATGCGTAG
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Protein sequence | MKRIIVVSAL ACVAADAVAQ SSVTLFGYIG AGVRWTDGVK GGSQIGFDNN AISGNIFGIK GAEDLGGGMQ AIFMLQSGFL TGTGALAKSP GLLFSQMAYV GLSGPYGRVT FGRQLNALED IGIALDPNSA QGQSLSTIPG VVWGGNFFTN DSRFNNTIKY VGTFGGATVR GSYSPGGVAG NQRAGSNVAV GTSYRFRTLL LGAAYQTTWN ADASQWARTI MGGATWQVGP ARLYLSYSDL AVSAAKAGAP ERRDRIPAVG IVYQVTPFLQ LSGATYYDFA QNLKNTGGAD GRKLTSYAML QYFLSKRTSL YA
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