Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5040 |
Symbol | |
ID | 4094001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 2318189 |
End bp | 2320549 |
Gene Length | 2361 bp |
Protein Length | 786 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638018322 |
Product | RND efflux transporter |
Protein accession | YP_624888 |
Protein GI | 107027377 |
COG category | [R] General function prediction only |
COG ID | [COG1033] Predicted exporters of the RND superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.981854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTCAATC GTCTGGTCAG TCGCCTGGAA AGGCTCTTCT TCGGTCATCG CGCGATCGTG CTCGCGGCGA TCGCGTTGTT CACCGTCGCG ATGGCCGTGT TCGCCGTGCA ACTGCGCATG GATGCCGGCT TCGACAAGCA GATGCCGATC GGGCACGAGT ACATCCGCAC GTTCCAGCAG TATCGCAACG ACCTGCTCGG CGCGAACCGG ATCACGGTGG TGGTGCGCGC GAAGCACGGC TCGATCTGGT CGAAGCAGGG GCTGACGCGG CTATACGACG TCACGCAGGC CGTCACGTAC CTGCCGAACG TCGACCGGAT CGGCGTGCGC TCGTTGTGGA CGCCGAACGC GTTCGTCAAC GAAGTGACCG ACGAAGGGTT TCGCGCGGAG CCGATCATTC CGGGCACCAT CACGCCGGAC CAGCTGACGC CGGACCGCGT GCAGGGCATT CGCCGCGCGA CCACGCTCGG CGGCTACGTC GGCACGCTCG TGTCGCACGG CGAGGACAGC GCGATGATCA CGGCCGAGCT GAACGAGCGC GACAGCGCCG GCAAGGTGCT CGACTACGTG GCGTTCAATC ACCTGCTCGA GGAGAAGATC CGCAAGCCGT TCGAGGATGC CGGCTACGAG ATCCAGATCA TCGGCTTCGC GAAGCAGATT GGCGACATCG CCGACGGCGC GACGGCCGTG CTCGGCTTCT GCGCGGTCGC GCTGTTGCTG ACCACGCTCG CGGTGTACTG GTACTGCCAT TCGGTGCGCT TCACGGTGCT GCTGGTCGCG TGTTCGCTCA CGTCGCTCGT GTGGCAGTTC GGCACGCTGA AGCTGCTCGG CTTCGGCCTC GATCCGCTCG CGGTGCTCGT GCCGTTCCTC GTGTTCGCGA TCGGCGTGTC GCACGGCGTG CAGCAGGTGA ACTTCATCGT CCGCGAGATC GCGCACGGGC AGAGTTCGTT CGATGCGGCG CGCCACAGCT TCAGCGGCCT GCTGATCCCC GGCGTGCTCG CGCTGATCAC CGCGTTCGTG TCGTTCATCA CGCTGTTGCT GATCCCGATC CCGATGGTGC GCGAGCTGGC GATCACCGCG TCGCTCGGCG TCGCGTACAA GATCGTGACG AACCTGATCC TGCTGCCCGT CGCGGCATCG TGCTTCAACT TCACGAAAAC CTATGCGGAC GCTTCGCTGA AGCGCGCGCA GCAGCGTGCG AAGCCGCTGC GCGTGCTCGC CCGCGTGGCG GAGCCGAAGT ACGCGGGCAT CACGGTCGCG CTGACGGTGG CGATCTTCGC CCTCGCCGCA TGGCAAAGCC GCGATCGCGT GATCGGCACG CTGCAGCCGG GCGCGCCGGA ACTGCGCGCG GACGCGCGCT TCAATCGCGA TGCGACGTCG ATCGCCGGCA ACTACGACAT GGGCCTCGAC TGGCTGACGG TGGCGATCGA ATCGACCGGC AAGGCATGCG ACAACCCGGC GGTCGGGCTG TACGAGGACG ACTTCTCGGC CGCGATGAAG ACCGAGCCGG GCGTCGTGTC GGTGCAGTCG TACTCGGCGA TGCTGCGCGC GTACAACCAG GGCTACAACG AGGATTTCCC GAAGATGAAC GTCGTGCCGA TCGCCGCCGA GAACTACGGC GCGGTGTCGG TCGACGTGTC GCGCCTGAAG GGCTTCATGA GCCGCGACTG CGGGATGACG GCCGTGCACC TGTTCCTGAC CGACCACAAG GCGACGACGA TCAACCGCAT CCTCGACGAC GTGAAGCAGT ACCGCGCGTC GCATCCGTTC CCCGGCATCA CGGTGCGGCT GGCCGCCGGC AACGCGGGCG TGCTCGCCGC GACCAACGAC GAGGTCGAGA AGAGCGAGCT GCCGATGATG CTCTACGTGT ATGCGGCGAT CCTGGTGCTC GTGTTCCTCG CCTACCGCGA CTGGCGCGCG ATGCTCGCCT GTTGCGTGCC GCTGTCGGTC GCGACCTTCA TCGGCTACTG GTTCATGAAG GAGCTGCAGA TCGGGCTGAC CGTCGCGACG TTGCCGGTGA TGGTGCTGGC CGTCGGCATC GGCGTCGATT ACGCGTTCTA CATCTACAAC CGGCTGCAGG TGCATCTCGC CGGCGGGCAG GACATCGTGA AGGCCGTGCA GTACGCGATG CTCGAAGTGG GCGTGGCCAC GATCTTCACC GCGATCACGC TGGCGATCGG CGTGGCGACG TGGAGCTTCT CGGCGCTCAA GTTCCAGGCG GACATGGGCA AGCTGCTCGC GTTCATGTTC ATCGTGAACC TGGTGATGGC GATGACCGCG CTGCCCGCGC TCGCGTCGCT GCTCGAACGC TGGTTCCCGC GCCGCAAGCC GGCTCGCGCG CCGGGCCTGT TCAGTCACTG A
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Protein sequence | MLNRLVSRLE RLFFGHRAIV LAAIALFTVA MAVFAVQLRM DAGFDKQMPI GHEYIRTFQQ YRNDLLGANR ITVVVRAKHG SIWSKQGLTR LYDVTQAVTY LPNVDRIGVR SLWTPNAFVN EVTDEGFRAE PIIPGTITPD QLTPDRVQGI RRATTLGGYV GTLVSHGEDS AMITAELNER DSAGKVLDYV AFNHLLEEKI RKPFEDAGYE IQIIGFAKQI GDIADGATAV LGFCAVALLL TTLAVYWYCH SVRFTVLLVA CSLTSLVWQF GTLKLLGFGL DPLAVLVPFL VFAIGVSHGV QQVNFIVREI AHGQSSFDAA RHSFSGLLIP GVLALITAFV SFITLLLIPI PMVRELAITA SLGVAYKIVT NLILLPVAAS CFNFTKTYAD ASLKRAQQRA KPLRVLARVA EPKYAGITVA LTVAIFALAA WQSRDRVIGT LQPGAPELRA DARFNRDATS IAGNYDMGLD WLTVAIESTG KACDNPAVGL YEDDFSAAMK TEPGVVSVQS YSAMLRAYNQ GYNEDFPKMN VVPIAAENYG AVSVDVSRLK GFMSRDCGMT AVHLFLTDHK ATTINRILDD VKQYRASHPF PGITVRLAAG NAGVLAATND EVEKSELPMM LYVYAAILVL VFLAYRDWRA MLACCVPLSV ATFIGYWFMK ELQIGLTVAT LPVMVLAVGI GVDYAFYIYN RLQVHLAGGQ DIVKAVQYAM LEVGVATIFT AITLAIGVAT WSFSALKFQA DMGKLLAFMF IVNLVMAMTA LPALASLLER WFPRRKPARA PGLFSH
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