Gene Bcen_5038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5038 
Symbol 
ID4093904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand- 
Start bp2316872 
End bp2317840 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content72% 
IMG OID638018320 
ProductBNR repeat-containing glycosyl hydrolase 
Protein accessionYP_624886 
Protein GI107027375 
COG category[R] General function prediction only 
COG ID[COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAGA CGCTCGTTGC CGGTACCGCG CTCTGTGCCG CCGTGGCGGC CTTCGCGCAA 
CCGCAGGATG GAACGGTGGC GGCCTGGGCC GCGAAGCCCG CGCATGCGTG GGCCGCGCCG 
ACGCACCGGA TGCTGATGGA TGCGGCGCAT GCCGGAGCGC GGATCGTCGC GGTCGGCGAG 
CACGGCATCG TGCTGCTGTC CGACGACGAC GGCAGGACCT GGCGGCAGGC GCGGCGCGTG 
CCGGTGTCCG CGACGCTGTC GGCCGTGTCG TTCGCGGATG CGAAGCACGG CTGGGCAGTC 
GGCCAGTGGG GCGCGATTCT CGCGACCGAC GACGGCGGCG ACACATGGGT CACGCAGCGG 
CTCGATACGT CGGTCGATCA GCCGCTGTTC TCGGTGCTGT TCACGAATGC GCGGGACGGG 
ATTGCCGTCG GCCTGTGGTC GCTGATGCTG CAGACGCACG ACGGCGGCAA GACATGGGCG 
CGCACGACGC TGCCGAAGCC GCCGGGCGGC GGCAAGGCCG ACCGCAATCT CTATCACGTG 
TTTGCCGACC CCGCCCATGC GCTCTACGTC GTGTCCGAAC AGGGGATGGT GCTCAAGTCG 
GCCGACGGTG GCGCGAACTG GGTCTATCTG CCGACGGGCG GCAAGGGCAC GTTGTGGTCG 
GGCGTCGCGA TGCCGGACGG CCGGATCGTG GTCGGCGGGC TGCTCGGCAG CCTGTTCGAG 
AGCCGCGACG GCGGCGCGAC GTGGGCGGCG CTGCAGACCG GCACGCGCAG CTCGATCACC 
GATCTCGTCG CGACCGGCGG CGGGCTGACC GGCGTCGGGC TGGACGGCCT CGTGCTGACG 
CAGCGCGTGG CCGGCGGCCC GTTCGACGTC GCGCAGCGCG CGGATCGGGC GACGCTCACC 
GCCGCGCTGA TCGACGCGCG CGGCAAGCCG GTGCTGTTTT CGCAGGACGG CGTGCTGGCC 
GCGCCGTGA
 
Protein sequence
MIKTLVAGTA LCAAVAAFAQ PQDGTVAAWA AKPAHAWAAP THRMLMDAAH AGARIVAVGE 
HGIVLLSDDD GRTWRQARRV PVSATLSAVS FADAKHGWAV GQWGAILATD DGGDTWVTQR 
LDTSVDQPLF SVLFTNARDG IAVGLWSLML QTHDGGKTWA RTTLPKPPGG GKADRNLYHV 
FADPAHALYV VSEQGMVLKS ADGGANWVYL PTGGKGTLWS GVAMPDGRIV VGGLLGSLFE 
SRDGGATWAA LQTGTRSSIT DLVATGGGLT GVGLDGLVLT QRVAGGPFDV AQRADRATLT 
AALIDARGKP VLFSQDGVLA AP