| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4918 |
|---|
| Symbol | |
|---|
| ID | 4096117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 2185151 |
|---|
| End bp | 2187865 |
|---|
| Gene Length | 2715 bp |
|---|
| Protein Length | 904 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638018201 |
|---|
| Product | 2-oxoacid dehydrogenase subunit E1 |
|---|
| Protein accession | YP_624767 |
|---|
| Protein GI | 107027256 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
|---|
| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type
[TIGR03186] alpha-ketoglutarate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACT TATCGACGGG GACACCCTCG ATCCTTTCCC TGGGCCAGAC GAAAGTCGAC
GACGACCCAC TCGAAACCGC CGAATGGCTC GATGCGCTCG ATGGCGTGGT TCGGCATGCC
GGTGCCGAAC GGGCTCAGTA CCTGTTCGAT CGGCTCGCGG CCCACGCGTC GTCCAACGGT
ATCGCAACGG CGCGCCTCAA TGTCACGCCC TACGTGAATA CGATCGCCGT CGCTCAGCAG
CCGCCGTATC CGGGAGACTT CGATATCGAA GAAAAGCTTG CCGCCGCGCT GCGCTGGAAT
GCGCTGGCCA TGGTCGTGCG GGCCAATCGC GCCTACGGTG AACTCGGCGG GCATATTGCC
GGCTATGCGT CGGCGGCCGA CCTGTTCGAA GTGGGCTTCA ATCATTTCTT TCGCGGCGCG
AACGATGCCA ACGGTGGCGA TCTCGTCTAT TTTCAACCCC ATTCCGCGCC GGGCGTTTAC
GCGCGGGCTT ACCTCGAAGG TTTTCTCGAC GAAGCGCATC TCGAGCATTA CCGACAGGAA
ATCACCGGTG CGGGCCTGTG TTCCTACCCG CATCCGTGGC TGATGCCGGA CTTCTGGCAG
TTCCCGACCG GCTCGATGGG CATTGGGCCG ATCAACTCGA TCTACCAGGC GCGCTTCATG
CGCTATCTGC AGAACCGCGG ACTGCAACGC ACGGAAGGCC GCAAGGTGTG GGGCTATTTC
GGCGATGGCG AAATGGACGA ACCCGAGGCG ATCGGCGCGC TGTCGCTGGC CGCGCGCGAG
CGGCTCGACA ATCTCGTGTT CGTGATCAAC TGCAATTTGC AGCGGCTCGA CGGACCGGTG
CGCAGCAATG GCCGCATCAT CGACGAACTC GAGGCGCAGT TTACGGGGGC GGGCTGGAAC
GTCATCAAGG TGTTGTGGGG TTCGGACTGG GATCCCCTGT TCGCACGCGA TCGCAGTGGG
GCGCTGTTGC GCGCGTTCGC GCACACCGTG GACGGCCAGT TCCAGACTTT TTCCGCCAAC
GACGGTGCCT ACAATCGTGA CCGCTTTTTC GGTCAGAACG CCGAACTGGC CGCACTCGCC
GCGCATCTGA GCAACGACGA TATCGACCGC CTGCGGCGCG GCGGCCACGA TGTGCGCAAA
TTGCACGCTG CCTACGACAA GGCGTCGAAA CACAGCGGGC AACCTACGGT GATTCTCGCG
AAGACGATGA AGGGCTTCGG CATGGGCTCG ATCGGCCAGG GGCGCATGAC CACACATCAG
CAGAAGAAGC TCGACATCGA ACAGTTGAAG GCGTTTCGCG ACCGCTTTCG CCTGCCGCTC
TCCGACGACG ATGTCGAACA ACTCAAGTTC TACAAGCCGG ACGAAAGCAG TGCCGTCATG
CAGTATCTGC ACGCGCGCCG TGCGGCGCTG GGCGGCTACC TTCCGCGCAG GCGCACAGCG
GCGTCGCACG CGCCGGCCGT GCCCGCGATG TCGTCGTGGG GACGATTCGC GCTCGATACC
AACGACAAGG AAATGTCGAC CACGATGGCG TTCGTGCGCA TGCTCGGCAA CCTGTTGAAG
GACGCCGAGC TGGGGCCGCG TGTGGTGCCC GTCGTCGCCG ACGAGGCGCG CACCTTCGGC
ATGGCGAATC TGTTCCGGCA AATCGGCATC TATTCTCCGC TCGGTCAACT GTACGAGCCG
GAAGACATGG GTTCGATGCT TTATTACCGT GAGGATACCG GCGGCCAGAT TCTGGAAGAG
GGCATCTCCG AGGCGGGCGC GGTGTCGTCG TGGATTGCCG CGGCGACGTC ATACAGCGTG
CACGATCTGA CGATGCTGCC GTTCTATATC TACTACTCGA TGTTCGGTTT CCAGCGCATC
GGCGACCTGA TCTGGGCGGC TGCCGATCAG CGCGCGCGCG GTTTCCTGAT CGGCGCGACG
GCCGGCAAGA CGACGCTCGG CGGTGAAGGT CTGCAGCATC AAGACGGCAC GAGCCACCTC
GCGGCCTCGA CGATACCGAA CTGCCGCGCG TACGATCCGG CCTTCGCGTA CGAAGTGGCG
ATGATCGTCG ACGAGGGCAT GCAGGAGATG ATCGCGCGTC AGCGCGACGT CTTTTACTAC
ATGACGGTCA CCAACGAAAA CTACGCACAA CGTTCGTTGA CTGAAGCGGA TCTCGATCGC
GTCCGTAGCG GCGTGCTCAA GGGGATGTAC GTGCTGGAGC CCGCGCAGAT CGAGATCGCG
CAGGTGCAGT TGCTCGGCTC GGGCGCGATT CTCGGTGAGG TCCAGGCCGC GGCACGGATG
TTGAAAGACG ACTGGAATAT CGACGCGGCC GTCTGGAGCG TGACGAGCTT TACCGAATTG
CATCGCGACG GCGTGTCCGC GGAGCGTGCG CAGCGGCTAC TGGATCACGG CGAGCCTGCG
GTGCCCTACG TGACGGCCGC CCTGGGCGCC GCACGTGGAC CGGTGATCGC CGCGACCGAC
TATGTGCGCG CCGTGCCCGA GCTGATCCGC GCGTATGTAC CGTCCCGCTA CGTCGTGCTC
GGCACCGACG GCTTCGGGCG CAGCGATACA CGTGCGGCGT TGCGTGCGTT CTTCGAAGTG
GACCGTGCGT CGATCGTGAT CGCCGCGCTG AAAGCACTCG TCGACGAGGG CCGGCAGGAC
CCTGACGTCG TGCGTCAGGC GATCGACCGA TACGGGCGAA GCGGAACCGG GCTGACCGAA
CCCTGGCTGG TCTAG
|
|---|
| Protein sequence | MTDLSTGTPS ILSLGQTKVD DDPLETAEWL DALDGVVRHA GAERAQYLFD RLAAHASSNG
IATARLNVTP YVNTIAVAQQ PPYPGDFDIE EKLAAALRWN ALAMVVRANR AYGELGGHIA
GYASAADLFE VGFNHFFRGA NDANGGDLVY FQPHSAPGVY ARAYLEGFLD EAHLEHYRQE
ITGAGLCSYP HPWLMPDFWQ FPTGSMGIGP INSIYQARFM RYLQNRGLQR TEGRKVWGYF
GDGEMDEPEA IGALSLAARE RLDNLVFVIN CNLQRLDGPV RSNGRIIDEL EAQFTGAGWN
VIKVLWGSDW DPLFARDRSG ALLRAFAHTV DGQFQTFSAN DGAYNRDRFF GQNAELAALA
AHLSNDDIDR LRRGGHDVRK LHAAYDKASK HSGQPTVILA KTMKGFGMGS IGQGRMTTHQ
QKKLDIEQLK AFRDRFRLPL SDDDVEQLKF YKPDESSAVM QYLHARRAAL GGYLPRRRTA
ASHAPAVPAM SSWGRFALDT NDKEMSTTMA FVRMLGNLLK DAELGPRVVP VVADEARTFG
MANLFRQIGI YSPLGQLYEP EDMGSMLYYR EDTGGQILEE GISEAGAVSS WIAAATSYSV
HDLTMLPFYI YYSMFGFQRI GDLIWAAADQ RARGFLIGAT AGKTTLGGEG LQHQDGTSHL
AASTIPNCRA YDPAFAYEVA MIVDEGMQEM IARQRDVFYY MTVTNENYAQ RSLTEADLDR
VRSGVLKGMY VLEPAQIEIA QVQLLGSGAI LGEVQAAARM LKDDWNIDAA VWSVTSFTEL
HRDGVSAERA QRLLDHGEPA VPYVTAALGA ARGPVIAATD YVRAVPELIR AYVPSRYVVL
GTDGFGRSDT RAALRAFFEV DRASIVIAAL KALVDEGRQD PDVVRQAIDR YGRSGTGLTE
PWLV
|
|---|
| |