| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4907 |
|---|
| Symbol | |
|---|
| ID | 4096106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 2171058 |
|---|
| End bp | 2172965 |
|---|
| Gene Length | 1908 bp |
|---|
| Protein Length | 635 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638018190 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_624756 |
|---|
| Protein GI | 107027245 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGG CACCGTGGAC TTCCGGCAAT CAATTCGCGA CCACCACCAT TCCGGCCTTG
CTGATCGAGC GCGTGAAGAA CGACGCCGAC GCAAACGCGT TCTTTCAGAG GCGTGCCGGA
GCGTGGGTGC CCACCACCTG GAAGGGCTAT GCGAACGCAG TCTGTTCCGT ATCCGCAGCC
CTCGGCGCGG CCGGTGTCGC ACGAGGCGAT CGGATTGCCA TCATGGGCGA CGTATCGCAG
GAGTGGCTGA TTGCCGACAT GGCGACGATC TGCTCGGGCG CGGTGACGGT AGGCGTCTAT
TTCACCGCGT CGGTCGAAGA GGTGCGCTAC TACCTGGAGG ATTCAGGGGC GACACTCGCT
TTTGCCGGAA GTGCCGAACA GCTTCGGGTC ATGAAAGCGG CCGATACGTC CAGCCGGCTC
CTCAAGATCG TGGTGCTCGA TCCGGACTGG AAGCGCTCGC CTGACGAAAC CGGCATGAAT
GTCGTTTCAC TCGCCGAGTT CGCGTCGCAT TTTGACGGCG ACGAAGTCGC TTATCTGCGT
GAGCAGTCAG AGCTTGCGCG GCCGACGGAC CTGGTGAGCC TGGGTTACAC CTCGGGAACC
ACGGGGGCGC CGAAAGGCGC GATGCTGACG CACGTGTCGA TGCTCGCGGG CGCGTTCACG
TGGCCGACCT TCTGTCCGGC GATATTGTCC GAACCGCAGC GCATGGTGAT CCATCTGCCG
CTTTCGCACA CGGTCGCGCG CATTCAGGCG ACGACGCTGC CGTTGATCGC GAAGACGGTA
CCTTACTTCG TCGACGTGTC GGCCGATTTC GCGAAGTGCA TTCAGGAAGT CAGACCGACG
TCCTATATGG CGCCGCCGCG CTTCTATCAG AAGTTCGCGA CCCAGATCAT CAACCACGTG
AACGGCAGCA GCGAAGCCGA GCGGAGAAAC TACACGCTCG CGCTCGGCAT CGCGCGGGAA
GTGCTGGCCG ATCGCCAGGA TGCAGGCACG GGCGACCCGT TCAAGGAACA GCTCTACGCC
ATCTGCCGTG AGCACGTGTT CAAGCCGTTG CTGGCCAGAA TCGGCTTCGA CGATTTGCGC
TATCCGTACA CGGCCTCCGC TCCGGTGCCG CCCGAGGTCG TCACGCTGTT TCAGTTGTGG
GGCGTCAACC TGAAAGAGAA TTACGGGCAA ACGGAGATGG TCGGCGGCAA CCTCGCGCAG
GTGACCGACT GGTCGAGGCC CGGCAACTCC GGCGTCCCGC TCGACGACCC CGCCTGGGAA
ACCCGCGTGT TGCCGGACGG CGAAATGATC GTTCGGGGGC CGGGGCTGTT CATCGGCTAC
TGGAACAAGG AAGCCGAAAC GAAGGCCGCG CTGCGGGACG GCTGGCTGTA CACCGGCGAT
ATCGTCGACG TCGGCGCGGA CGGGTCGTAC AAGCTGATCG ATCGAAAGAA GGAGCTCATC
AATACGGCCG CCGGCAAATC GATCAGCCCG GTGCAGGTCG AAAACGAACT GCGCCAGAGT
CCGTACATTA CCGAGGCACT CGTGATCGGC GAAGGGCGCA AGTATCTGAC GGCGTTGATC
GAAGTCGACG GCACGCTCGC CATGGACTGG GCCAGGACGC ACGACCCGTC GGTCACGCAG
TACGCCGATC TGGCCAGTTC GCAGCCCGTT ATCGACCTGA TCCGTGAAGA AGTGGAAAAG
GCAAATGCGA GGTTGGCGCG CGCGGAGCAG ATCAAGGCGT TCAGGATATT CCCCGAGGAA
CTCACACCGG AAAACGGCGT GATGACCGCC ACGCGCAAGA AACGCCGCAA GGCATTGATG
GCACGCTACG CGCACATTAT TGCCGGCCTT TACGACGATG CCGAAGAGCA GTTGATCAAG
GAGCAGCTCG TCGGTTCAGG GACAGCAGCG TCCGTTCACC GGCAATAG
|
|---|
| Protein sequence | MSAAPWTSGN QFATTTIPAL LIERVKNDAD ANAFFQRRAG AWVPTTWKGY ANAVCSVSAA
LGAAGVARGD RIAIMGDVSQ EWLIADMATI CSGAVTVGVY FTASVEEVRY YLEDSGATLA
FAGSAEQLRV MKAADTSSRL LKIVVLDPDW KRSPDETGMN VVSLAEFASH FDGDEVAYLR
EQSELARPTD LVSLGYTSGT TGAPKGAMLT HVSMLAGAFT WPTFCPAILS EPQRMVIHLP
LSHTVARIQA TTLPLIAKTV PYFVDVSADF AKCIQEVRPT SYMAPPRFYQ KFATQIINHV
NGSSEAERRN YTLALGIARE VLADRQDAGT GDPFKEQLYA ICREHVFKPL LARIGFDDLR
YPYTASAPVP PEVVTLFQLW GVNLKENYGQ TEMVGGNLAQ VTDWSRPGNS GVPLDDPAWE
TRVLPDGEMI VRGPGLFIGY WNKEAETKAA LRDGWLYTGD IVDVGADGSY KLIDRKKELI
NTAAGKSISP VQVENELRQS PYITEALVIG EGRKYLTALI EVDGTLAMDW ARTHDPSVTQ
YADLASSQPV IDLIREEVEK ANARLARAEQ IKAFRIFPEE LTPENGVMTA TRKKRRKALM
ARYAHIIAGL YDDAEEQLIK EQLVGSGTAA SVHRQ
|
|---|
| |