Gene Bcen_4780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4780 
Symbol 
ID4096038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand- 
Start bp2051031 
End bp2052083 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content60% 
IMG OID638018066 
Producttransposase, IS605 OrfB 
Protein accessionYP_624632 
Protein GI107027121 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCTTG TCTACCGCTA CCGGGTGAAA TCGCTCAACG GACTGCTTAA CAAGCAGGGC 
CGCGCGGTGA ACTACGTCTG GAACTTCTGC AACGACACGC AGAAGCACGC GCTCAAGTGG 
GGCAAGAAGT GGCCTACAGG ATTCGACCTG AACGTGCTGA CGACCGGCAG CAGCAAGGAA 
CTCGGTATTC ACTCCGGCAC GGTTAACGCG ACGTGCGAGC AATATGCGAA GTCGCGCAGC 
CAGCGTCGAC GCCCTTATCT GCGCTATCGC GGCAGGAAAT CGCTCGGTTG GGTGCCGCTG 
AAGGGCCGAG ACCTGAAGCG CGAAGGCGAA GCGTTTCGCT TTGCCGGCAA CACCTTCCGC 
GTGTTCAACA GTCGACCGCT TCCCGAAGGC AAGATCAAGG ACAGGAGCAA CTTCGCGCAG 
GACGCGCGTG GTAATTGGTT TCTCAATATC GTGATCGAGA TGCCCGATGT GCAGGCCCGC 
CCGATTCGTT CCGGTGTCGG CATCGATCTC GGCTTGAAAG ACTTCGCCAC ACTTTCGACC 
GGCGAGAAGT TGCCCAATGA CCGGTTCGGC CGACGAGCGG CGGAAAAGCT GGCGAAAGCG 
CAGCGAGCGC GAAAGCACAA GCGGCATATC GCGAAGCTGC ACGCGAAGAT CGCCAATGCC 
CGCGCCGACT TCCAGCACAA GCTCGCGCTC GATCTGGTGC GGCGGTTCGA TTACATCGCG 
GTCGGCAACG TGTCGGCCGC AAAACTCGCC AGAACCAGGA TGGCGAAGAG CGTCTACGAC 
GCATCCTGGT CGTCCTTCCG AAACAAGCTC CGCTACAAAG CGATCGCGCA CGGGGCCACG 
TTCGAGGAGG TGGACGAAAG TGGTTCTACC CAGTCCTGTT CGGCGTGCGG ATCGCAAGAC 
AGCACGACGC GGCCGAAAGG TATCGCGGGG CTGCGAGTAA GAGAGTGGGC CTGCAGTAGA 
TGTGGTGTCG TGCATGATCG AGATATCAAC GCTGCGCTGA ACATTCTCCG ATGCGGACGT 
GCATCGCCAG GTGTGGGAAT CCTCTGCCTT TAG
 
Protein sequence
MILVYRYRVK SLNGLLNKQG RAVNYVWNFC NDTQKHALKW GKKWPTGFDL NVLTTGSSKE 
LGIHSGTVNA TCEQYAKSRS QRRRPYLRYR GRKSLGWVPL KGRDLKREGE AFRFAGNTFR 
VFNSRPLPEG KIKDRSNFAQ DARGNWFLNI VIEMPDVQAR PIRSGVGIDL GLKDFATLST 
GEKLPNDRFG RRAAEKLAKA QRARKHKRHI AKLHAKIANA RADFQHKLAL DLVRRFDYIA 
VGNVSAAKLA RTRMAKSVYD ASWSSFRNKL RYKAIAHGAT FEEVDESGST QSCSACGSQD 
STTRPKGIAG LRVREWACSR CGVVHDRDIN AALNILRCGR ASPGVGILCL