| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4759 |
|---|
| Symbol | |
|---|
| ID | 4095425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 2030871 |
|---|
| End bp | 2032079 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638018045 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_624611 |
|---|
| Protein GI | 107027100 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.245052 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACCG ACTCATCGAC CGGCATTCTT CGGCAGATTC CGCGCAGCGT GTGGGTGCTC
GGCTGTGTCA GCCTGCTGAT GGACGTGTCG TCCGAAATCA TCCACAGCCT GTTGCCGATG
TTCCTGATGG CGGGGCTCGG TGCGAGCGCG ACGACGATCG GCCTGATCGA GGGGATCGCC
GAGGCGACGT CGCCGGTCGT CAAGGTGTTC TCCGGCACGC TGAGCGACTA TCTGCGCAAT
CGCAAATGGC TCGCGGTGGC CGGCTACGCC CTCGGCGCGC TCAGCAAGCC GCTGTTCGCG
ATCGCGCCGA CGATCGGTGT CGTGGTGACC GCACGGATCG TCGACCGCGT CGGCAAGGGG
ATTCGCGGCG CGCCGCGCGA TGCGCTCGTC GCCGACGTGA CGCCCGTTCA CCTGCGCGGC
GCCGCGTACG GGTTGCGTCA GTCGCTCGAC ACGGTGGGCG CGTTCCTCGG GCCGCTGCTG
GCCGTCGTCA TCATGCTGAT GTGGCGCGAC GATTTCCGCC TCGCGTTCTG GCTGGCCGTG
ATCCCCGGCG TGCTCGCCGT GGCGCTGCTC GCGGTCGGCA TTGATGAGCC CGCACGTGCG
CCGGGCGAGA AGCGCGTCAA TCCGGTTCGC CGCGAGGTCG TCGCGCAACT CGGCGCGCGC
TACTGGTGGG TCGTGGCCGT CGGCGGCGTG TTCGCGCTGG CGCGTTTCAG CGAGGCGTTC
CTCGTGCTGC GCGCGATGAG CAGCGGCGTG CCCGTCGCAC TCGTGCCGCT CGTGATGGTC
GCGATGAACG TCGTATACGC GTTGTCCGCT TACCCGTTCG GTAAGCTCGC CGATACGACG
AGCCACACGA AACTGATGGT GGTCGGGCTC GCGCTGCTGA TCGTCGCCGA TATCGTGCTG
GCGCACGGCG CGCACTGGCC GACCGTGCTC GTCGGTGTCG CGCTGTGGGG CCTCCATATG
GGGATGACGC AAGGGCTGCT CGCGACGATG GTCGCGCAGG CCGCGCCGGC CGAATTGAGA
GGGACGGCGT TCGGCGTGTT CAACCTGATC AGCGGCATCG TCACGCTCGT ATCGAGCGTC
GTCGCGGGTG CCCTGTGGGA CCAGATGGGC GCCGCCGCCA CGTTCTATGC GGGGGCCGTA
TTCAGCGCAG CGACCATCGT GTTGCTCGTG TGCGTTCGCA CGTCGTTCGG CGCGGTGCAG
GATCGCTAG
|
|---|
| Protein sequence | MQTDSSTGIL RQIPRSVWVL GCVSLLMDVS SEIIHSLLPM FLMAGLGASA TTIGLIEGIA
EATSPVVKVF SGTLSDYLRN RKWLAVAGYA LGALSKPLFA IAPTIGVVVT ARIVDRVGKG
IRGAPRDALV ADVTPVHLRG AAYGLRQSLD TVGAFLGPLL AVVIMLMWRD DFRLAFWLAV
IPGVLAVALL AVGIDEPARA PGEKRVNPVR REVVAQLGAR YWWVVAVGGV FALARFSEAF
LVLRAMSSGV PVALVPLVMV AMNVVYALSA YPFGKLADTT SHTKLMVVGL ALLIVADIVL
AHGAHWPTVL VGVALWGLHM GMTQGLLATM VAQAAPAELR GTAFGVFNLI SGIVTLVSSV
VAGALWDQMG AAATFYAGAV FSAATIVLLV CVRTSFGAVQ DR
|
|---|
| |