| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4610 |
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| Symbol | |
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| ID | 4094327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008061 |
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| Strand | + |
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| Start bp | 1868507 |
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| End bp | 1869949 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638017897 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_624464 |
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| Protein GI | 107026953 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGC TACTCGTCGC GCTGGCCGTC AGCGCATTCG CCGCCGGGTG TGCGGTGCAG
CCCGCGCAGC ATCCGGCGCT GAACGACTCC GTCCAGACGC TCGCGCCCAC CGCGTGGGAT
ACCGACGTGC CGCGCGCGGA CATCGATGCC GCCGCCTGGT GGGCGCAGTT CCACGACCCC
GTGCTCGACC GGCTGATCGC GACCGTGCTC GACGGCAACC TCGATCTGCA GGCCGCCGCC
GAACGCGTGA AGCAGGCGCA GGCGCTGACC GTGCAGAAGC GCGCGGTGCT GCTGCCCGAA
CTCGACGCGA CTGCGCACGC GGCCAACGCG CGGCAGAACA CGCCGCCGCC GCTCGGTTAT
GTGCGGCAGG CTGGTGCGGG GCTTGCGCTG AGCTGGTCGC CCGATGTGTT CGGCGGTGAA
CGGCTCGATC TGCTGGCCGC TCAAGCGGAG TTGGTCGGGC AAAAGCATGC GGAAGATGCG
ATGCGCCTCG CGCTCGCGGC CGATGCGGCA TCCGCGTATG TCGATCTGCG CTGGGCGCAG
CAGGAACTGA AGATCCTGCA GGAAAACGCG AAGATCCGGC AGCATGCGCT CGAACTCACG
CGCAAGCGGC AGGCGTTCGG GCTGTCGACG GAACTCGACG TGACGCGTGC GCAGAACCAG
CTCGATGCGC TCGAAGCCAG GATTCCGCCG ACGCAGGCGC AGATTTCGCA TCAGCTGAAT
CTGATCGCCG TGTATTCGGG GCGGACGCCG GAATCGGTCG ATCGGCTCGT GTTGGCGCAG
GCTGGGGAGA TTCCCGCGCC GCCGGTTGGC GCGCCAGGGA CGCTGCCTTC GCAGGCGTTG
TTGCGGCGGC CGGATGTGCT GACTGCCTAT GCGCAGGTCG AGCGGCGTGC CGCGCAAGTC
GGTGTGGCGA AGGCCGAGCG GTATCCGAAG TTTTCGTTGA ACCTGACGGA CGGGATTCTG
GCGGCTTCCT ATCTCGGGTT GCCGACGTTG ACCGATAACC TGTTCAGCGC GGCACTGAGC
GCGACGAGCC CGATCTTCAA CGCGGGACGG ATTACCGCCG ATATCTCGCA AAGCGAAAGC
CGGATGCGCG AGTCGGAACT CGGGTTACGG CAGACGATGC TGCAAGCGCT GCGGGAAGTC
GAGGATGCGC GCGCGAATCT CGTCAGTTCC GATGAGGCGA CGCGAAGGCT GGGTAGCGCA
TTGGCGGCTT CCGATAAAGC GCTTGGGTTG GCGAATCAGC TTTATAAGGG CGGCGCGACG
GATTTTCTGG ACGTGCTGTC GGCGCAGGAG GTTTATCTGC GGGATTCGGA TTCGCTCAAT
CAGGTCAAGC GCGAGCACGC GCTGGCGGCG GTGGCGTTGT ATCGGTCGCT TGGGGGTGGG
TGGAGCAGGA ATGACGCGGC GGGGGGAACA CAGACGGAAA CTGACGCTGT GGCGAAAAAC
TAG
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| Protein sequence | MKKLLVALAV SAFAAGCAVQ PAQHPALNDS VQTLAPTAWD TDVPRADIDA AAWWAQFHDP
VLDRLIATVL DGNLDLQAAA ERVKQAQALT VQKRAVLLPE LDATAHAANA RQNTPPPLGY
VRQAGAGLAL SWSPDVFGGE RLDLLAAQAE LVGQKHAEDA MRLALAADAA SAYVDLRWAQ
QELKILQENA KIRQHALELT RKRQAFGLST ELDVTRAQNQ LDALEARIPP TQAQISHQLN
LIAVYSGRTP ESVDRLVLAQ AGEIPAPPVG APGTLPSQAL LRRPDVLTAY AQVERRAAQV
GVAKAERYPK FSLNLTDGIL AASYLGLPTL TDNLFSAALS ATSPIFNAGR ITADISQSES
RMRESELGLR QTMLQALREV EDARANLVSS DEATRRLGSA LAASDKALGL ANQLYKGGAT
DFLDVLSAQE VYLRDSDSLN QVKREHALAA VALYRSLGGG WSRNDAAGGT QTETDAVAKN
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