Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_4471 |
Symbol | |
ID | 4094647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 1712833 |
End bp | 1715976 |
Gene Length | 3144 bp |
Protein Length | 1047 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638017758 |
Product | hydrophobe/amphiphile efflux-1 HAE1 |
Protein accession | YP_624326 |
Protein GI | 107026815 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAAT TCTTTATCCG ACGCCCGGTG TTTGCGTGGG TGATCGCGCT CTTCATCATC CTGACGGGGC TGATCGCGAT CCCGCAACTG CCGGTCGCGC GCTACCCGTC GGTCGCGCCG CCGTCTGTCA CGATCACCGC GAGCTACCCG GGCGCCACGC CGCAGACGAT GAACGACGGC GTGCTGAGCC TCATCGAGCG CGAATTATCC GGCGTCAAGA ACCTGCTGTA CTTCGAATCG TCGGCCGATA CCTCGGGCCA GGCACAGATC ACCGTGACGT TCAAGCCCGG CACTAATCCG GAGATGGCGC AGGTCGACGT GCAGAACAAG ATCAAGTCGG TCGAGCCGCG CCTGCCCGCC GCCGTGCGTC AGAACGGACT AATCGTCGAA TCCGCGTCGT CAGGGTTCCT GATGATCGTC AGCCTGCGCT CCGACAACGG CCGCTTCGAC GAAGGCGCGC TCGCCGACTA CATGGCGCGC AGCGTCTCCG AGGAACTGCG GCGCATCGAC GGCGTCGGCC GTGTGCTGCA GTTCGGTTCG GAGCGCGCGA TGCGCATCTG GGTCGATCCG CAGAAGCTGA TCAATTTCGG CCTGTCGATG AGCGACCTGA CGACCGCGAT CGGGCAGCAG AACGTGCAGA TCGCACCGGG CAGCCTCGGT GCGCTGCCCG CGCTGCCGGG CCAGCGCGTG ACCGTGCCGC TCACCGCGCA AGGTCAGCTC GCCACACCGG AAGCGTTCGC GAAGGTCGTG CTGCGCGCGA ATGCGGACGG CTCGAAGGTC GTGCTCGGCG ACGTCGCCCG CGTCGAACTC GGCTCGCAGA ACTACACGTT CGTGAGCCGC GAGAACAACA AGCCGGCCAC CCTCGCCGGC GTGCAACTCG CGCCGGGTGC CAACGCGGTG AAGACCGCGG ACGCGATCCG CGCCCGCATG GCCGAACTGA GCAAGTCGAT GCCGTCGGGC ATGAGCTACT CGATCCCGCT CGACACGTCG CCGTTCGTGA AGATCTCGAT CGAGAAAGTG CTGCACACGC TGCTCGAGGC GATGGTGCTC GTGTTCCTCG TGATGTACCT GTTCCTGCAG AACGTGCGCT ATACGCTGAT CCCGGCCATC GTCGCGCCGG TCGCGATGCT CGGCACGTTC ACGGTGATGC TGCTGACCGG CTTCTCGATC AACGTGCTGA CGATGTTCGG CATGGTGCTC GCGATCGGCA TCATCGTCGA CGATGCGATC GTCGTCGTCG AGAACGTCGA ACGCCTGATG GCCGAGGAAG GACTGTCGCC GAAGGACGCG ACGTCGAAGG CGATGAAGGA GATCACCGGC GCGATCATCG GCGTCACGCT GGTGCTGACC GCGGTGTTCC TGCCGATGGC GATGGCGAGC GGCTCGGTCG GCGTGATCTA CAAGCAGTTC ACGCTGTCGA TGGCCGTGTC GATCCTGTTC TCCGCGCTGC TCGCGCTGAC GCTCACGCCG GCCCTGTGCG CGACGATGCT CAAGCCGATC GCAGCGGGTC ATCACGAGAA GCGCGGCTTC TTCGGCTGGT TCAACCGCCG CTTCGATCGC CTGACGAAAT GGTACGAGAC GCGCGTCGGC CGCCTCGTCG GTCGCACGGG CCGCGTGATG CTGGTGTTCG TCGCGATTTC GGGTGCACTG GTGCTCGGTT TCCGCAGCCT GCCGTCGTCG TTCCTGCCGG ACGAAGACCA GGGCTACTTC ATCACCAGCT TTCTGTTGCC CGCCGACGCT ACCGCCGAGC GTACGCACGA CGTGGTCAAG ACGCTGGAGA AGCATCTTGC TTCGCGTCCG GCAATCCAGT CGAGCATTTC CGTGATCGGC TACGGCTTCT CGGGCCAGGG CTCGAACGCG GCGATCAACT GGTCGGTGAT GAAGGACTGG AAAAACCGTG GCGGCGCGTC GACGATCGAG GAAGGCATGC TCGCGCAGCA GGCGATGGCC GGCGTGACCG AAGGCACGGT GATGAGCCTG CTGCCGCCGG CGATCGACGA ACTCGGCAAC AGCTCGGGCT TCTCGATGCG TCTGGAAGAC CGCGCCAACC AGGGCGCGGC GGCGCTCAAG GCAGCGGAAG TCAAGCTGCT CGAACTCGCC GCGCAAAGCA AGGTCGTGAC CGGCGTGTAC CCCGACAGCC TGCCGGCCGG CACCAGCATC CGCCTCGAGA TCGATCGCGC GAAGGCGCAG GCGCTCGGCG TGTCGTTCAC GACGCTCAGC GACACGCTGT CGACCGCGAT GGGTTCGACC TACGTGAACG ACTTCCCGAA CGCAGGCCGC ATGCAGCAGG TGATCATCCA GGCCGACGCG CCGGCACGCA TGCAGATCGA CAACGTGATG AAGCTGTACG TGCGCAACGC GGCCGGCGGC ATGGTGCCGC TGTCCGAGGT GGTGCGCCCC GTGTGGACCG ACACGCCGCT GCAGATGGTG CGCTTCAAGG GCTATCCGTC CGCGCGTATC GCCGGCAACG CGGCGCCCGG CCAGTCGAGC GGCGCGGCGA TGGCCGAGAT GGAACGGCTC GCCGCGCAAC TGCCGCCGGG CTTCGCGGTC GAGTGGACCG GCCAGTCGCT ACAGGAACGC CAGTCGGCGT CGCAGGCGCC GATGCTGATG GTGCTGTCGA TGATCGTCGT GTTCCTGGTG CTCGCCGCGC TGTACGAAAG CTGGTCGATC CCGCTGTCGG TGATGCTCGT GGTGCCGCTC GGCCTGATCG GCGCGATCGG TGCGGTGCTG TTGCGCGGGA TGCCGAACGA CGTGTTCTTC AAGGTCGGGA TGATCACCGT GATCGGCCTG TCCGCGAAGA ACGCGATCCT GATCGTCGAG TTCGCGAAGC AGTTGCGCGA GGAAGGCAAG GGCTTGATCG AAGCGGCCGT GCAGGCGTCG AAGCTGCGCC TGCGCCCGAT CCTGATGACC TCGCTCGCGT TCGGCCTCGG CGTCGTGCCG CTGATGATCG CGACCGGCGC CAGCGCCGAA ACGCAGCACG CGATCGGCAC TGGCGTGTTC GGCGGCATGG TGACCGCCAC GGTGCTGGCC ATTTTCTTCG TCCCTGTTTT CTTTGTGTTC GTGATGAGTA TCCAGGAGCG TATCGGCGCA TGGCGGGCTT CCCGCAAGCA GCCGGCTTCC CCGACTCACG AACAGGAAGG TTGA
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Protein sequence | MAEFFIRRPV FAWVIALFII LTGLIAIPQL PVARYPSVAP PSVTITASYP GATPQTMNDG VLSLIERELS GVKNLLYFES SADTSGQAQI TVTFKPGTNP EMAQVDVQNK IKSVEPRLPA AVRQNGLIVE SASSGFLMIV SLRSDNGRFD EGALADYMAR SVSEELRRID GVGRVLQFGS ERAMRIWVDP QKLINFGLSM SDLTTAIGQQ NVQIAPGSLG ALPALPGQRV TVPLTAQGQL ATPEAFAKVV LRANADGSKV VLGDVARVEL GSQNYTFVSR ENNKPATLAG VQLAPGANAV KTADAIRARM AELSKSMPSG MSYSIPLDTS PFVKISIEKV LHTLLEAMVL VFLVMYLFLQ NVRYTLIPAI VAPVAMLGTF TVMLLTGFSI NVLTMFGMVL AIGIIVDDAI VVVENVERLM AEEGLSPKDA TSKAMKEITG AIIGVTLVLT AVFLPMAMAS GSVGVIYKQF TLSMAVSILF SALLALTLTP ALCATMLKPI AAGHHEKRGF FGWFNRRFDR LTKWYETRVG RLVGRTGRVM LVFVAISGAL VLGFRSLPSS FLPDEDQGYF ITSFLLPADA TAERTHDVVK TLEKHLASRP AIQSSISVIG YGFSGQGSNA AINWSVMKDW KNRGGASTIE EGMLAQQAMA GVTEGTVMSL LPPAIDELGN SSGFSMRLED RANQGAAALK AAEVKLLELA AQSKVVTGVY PDSLPAGTSI RLEIDRAKAQ ALGVSFTTLS DTLSTAMGST YVNDFPNAGR MQQVIIQADA PARMQIDNVM KLYVRNAAGG MVPLSEVVRP VWTDTPLQMV RFKGYPSARI AGNAAPGQSS GAAMAEMERL AAQLPPGFAV EWTGQSLQER QSASQAPMLM VLSMIVVFLV LAALYESWSI PLSVMLVVPL GLIGAIGAVL LRGMPNDVFF KVGMITVIGL SAKNAILIVE FAKQLREEGK GLIEAAVQAS KLRLRPILMT SLAFGLGVVP LMIATGASAE TQHAIGTGVF GGMVTATVLA IFFVPVFFVF VMSIQERIGA WRASRKQPAS PTHEQEG
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