Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_4452 |
Symbol | |
ID | 4094667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 1689318 |
End bp | 1691450 |
Gene Length | 2133 bp |
Protein Length | 710 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638017739 |
Product | TonB-dependent copper receptor |
Protein accession | YP_624307 |
Protein GI | 107026796 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01778] TonB-dependent copper receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.876031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAATT TCCTGTTGCG TGCGCCGCGG GCGCCACGCA ATGCCGGTGC GCGGCCTCTG CCGCGCGTAC TGAAACTCAC CGTTCCTGCG CTGGCTGTCG GCGCGCTGGC CGCGAGCGCT GCCGCAGCCG AAACCACGCC GGCGGCCGGT GCGCCGTCGG GCGATGCGGC GATGCTGTTG CCGCCCGTCG AAGTCGTCGC GTCGCCGCTG TCGACGCCGC TCGTCGTCGT CACCGATCCG AAGGCGCCGC GCCAGCCGCT GCCCGCCAGC GACGGCGCCG ATTACCTGAA GACGATTCCC GGCTTCACGT CGATCCGTAG CGGCGGTACG AACGGCGACC CCGTGCTGCG CGGGATGTTC GGTTCGCGGC TGAACATCCT GGCGAACGGA ATGCCGACGC TCGGCGCGTG CCCGAACCGG ATGGATGCGC CGACCTCGTA CATCGCGCCG GAAAGCTATG ACAAGGTCAC CGTCGTGAAG GGGCCGCAGA CCGTGCTGTA CGGTCCGGGT GCGTCGGCCG GCACCGTGCT GTTCGAGCGC GTGACGCCGC GTTTCGAGCG CCCCGGCATG CGCTTCGACG GCAGTCTCGT CGGCGGGTCG TTCGGCCGCA ACGACCAGAA CATCGACCTG ACCGCAGGCA CGCCGGACAT CTATGGCCGC GTGACCGCGA ACCACGCGCA TTCGCAGGAC TACAAGGACG GCAACGGCAA CACCGTGCCG TCGCAGTGGG ACAAATGGAA CGCCGATGCA GCGCTCGGCT GGACGCCCGA CGACCATACG CGACTCGAGC TGACCGCCGG CACCGGCGAC GGCTATGCGC GCTACGCGGG CCGCGGGATG GATGGCGCGC ATTTCCGCCG CGAGACGTTC GGCCTGTCGT TCGACAAGCG GCATCTCGGC GACGTGCTCG ACCGGATCGA GGCGCGCGTG TACTACAACG AAGCCGATCA CGTGATGGAC AACTACACGT TGCGGCAGCC CGACCCGACG AGCAGCATGC CGATGCGCAT GGCCGCGGAC GTGCGGCGCC GCACGGTCGG CGCGCGTGCC GCCGCGACGT TCCGCTTCGG CGACGATTTC AAGCTCGTCA CGGGCGTCGA TGCGCAATCG AACCGGCTCG ATTCGCGTGC GTCGATGGGG CAGCAGAACT ACCGCGACCA GCCGTGGGAT GCCCAGGCGA CCATGTGGAG CGCGGGCGTG TTCAGCGAGC TGACGTGGTA TGCGAGCGAC GTCTCGCGTG TGATCGGCGG CGCGCGCGTC GACTATGCGA GCGCACGCGA CAAGCGCGCG ATGAAGAGCG GCATGATGAT GAGCAAGCCG AACCCGACTT TCGACGACGA TCGGACGAAG GTGCTGCCGA GCGGCTTCGT GCGCTACGAG CGCGATCTCG CGTCGCTACC CGTCACGTGG TACGCGGGGA TCGGCCACGC GGAGCGTTAT CCGGACTACT GGGAACTGTT CTCCGCGACG CGCGGGCCGG CCGGTTCGAT CAACGCGTTC TCGGCGGTGC AGCCGGAGAA GACCACGCAG CTCGATATCG GCGCGCAATA CAAGAGCGAC CGGTTCGATG CATGGGTGTC GGCGTACGCG GGCTACGTCC AGGACTTCAT CCTGTTCAAC TATGCGGCCG GCATGATGGG CCCGATCACG CAGGCAACCA ACGTCAACGC GCAGATCATG GGCGGCGAAG CCGGCGTGTC GTGGCGGCCG GTCGCGCCGC TGCGCGTCGA GACGTCGCTC GCGTATGCGT GGGGGCGCAA CGTGGCGAGC GGCGATCCGC TGCCGCAGAT GCCGCCGCTC GAGGCGCGCA TCGGCCTCGA ATACACGCGC GGCGCGTGGT CGGCGGGCGG CCTGTGGCGC ATCGTTGCGC CGCAGCATCG CTACGCGCTG AACGAGGGCA ACGTGGTCGG CAAGGACTTC GGCCCGAGCG CCGGATTCGG CGTGCTGTCG CTGCATACGC AATACAACGT CAGCAAGACC GTGCAAATCT CGGTCGGCGT CGACAACGTA CTGAACAAGG CCTACACCGA GCATCTGAAC CTCGCCGGCA ACGCGGGTTT CGGCTATCCG GCGAACGCGC CGGTGATGGA GCCGGGGCGT ACCGCGTGGG TGCGCGTGAG CGCGAAGCTG TAG
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Protein sequence | MTNFLLRAPR APRNAGARPL PRVLKLTVPA LAVGALAASA AAAETTPAAG APSGDAAMLL PPVEVVASPL STPLVVVTDP KAPRQPLPAS DGADYLKTIP GFTSIRSGGT NGDPVLRGMF GSRLNILANG MPTLGACPNR MDAPTSYIAP ESYDKVTVVK GPQTVLYGPG ASAGTVLFER VTPRFERPGM RFDGSLVGGS FGRNDQNIDL TAGTPDIYGR VTANHAHSQD YKDGNGNTVP SQWDKWNADA ALGWTPDDHT RLELTAGTGD GYARYAGRGM DGAHFRRETF GLSFDKRHLG DVLDRIEARV YYNEADHVMD NYTLRQPDPT SSMPMRMAAD VRRRTVGARA AATFRFGDDF KLVTGVDAQS NRLDSRASMG QQNYRDQPWD AQATMWSAGV FSELTWYASD VSRVIGGARV DYASARDKRA MKSGMMMSKP NPTFDDDRTK VLPSGFVRYE RDLASLPVTW YAGIGHAERY PDYWELFSAT RGPAGSINAF SAVQPEKTTQ LDIGAQYKSD RFDAWVSAYA GYVQDFILFN YAAGMMGPIT QATNVNAQIM GGEAGVSWRP VAPLRVETSL AYAWGRNVAS GDPLPQMPPL EARIGLEYTR GAWSAGGLWR IVAPQHRYAL NEGNVVGKDF GPSAGFGVLS LHTQYNVSKT VQISVGVDNV LNKAYTEHLN LAGNAGFGYP ANAPVMEPGR TAWVRVSAKL
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