| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4409 |
|---|
| Symbol | |
|---|
| ID | 4094722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 1640747 |
|---|
| End bp | 1641940 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638017696 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_624264 |
|---|
| Protein GI | 107026753 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACAACC TTCCTGATGA TCGCGGCCAT TTCGGCCCGT ATGGCGGCGT GTTCGTCGCC
GAGACGCTGA TTCACGCGCT GGACGAACTG CGCGCGGCGT ATGAAAAGTT CCAGAACGAT
CCCGACTTCG TCGCCGAATT CGAGCGCGAG CTGAAGTATT TCGTCGGCCG CCCGTCGCCG
ATCTATCACG CGCAGCGCTG GAGCGAGATG CTCGGCGGCG CGCAGATCTA CCTGAAGCGC
GAAGACCTGA ACCACACGGG TGCGCACAAG ATCAACAACG TGATCGGCCA GGCGCTGCTC
GCGAAGCGCA TGGGCAAGAA GCGCGTGATC GCGGAAACGG GCGCCGGCCA GCACGGCGTC
GCGACCGCGA CGATCTGCGC GCGCTTCGGG ATGGAGTGCG TCGTCTACAT GGGCTCGGAG
GACGTGCGCC GGCAGGCCGC GAACGTCTAC CGGATGAAGC TGCTGGGCGC GACCGTCGTG
CCGGTCGAAT CGGGTTCGCG CACGCTGAAG GACGCGCTGA ACGAAGCGAT GCGCGACTGG
GTCACGAATA TCGAAAGCAC GTTCTACATC ATCGGCACGG TCGCGGGCCC GCACCCGTAC
CCGATGATGG TGCGCGACTT CCAGCGCGTG ATCGGTGACG AGTGCAAGGT GCAGATGCCC
GAGCTCGCCG GCCGCCAGCC GGACGCGGTG ATCGCGTGCG TCGGCGGCGG GTCGAACGCG
ATGGGCATCT TCTATCCGTA CATCGACGAT ACCTCGGTGC AACTGATCGG CGTCGAAGCG
GCCGGCGACG GCCTCGACAC GGGCCATCAC GCTGCCTCGC TGATCGCCGG CAGCCCCGGC
GTGCTGCACG GCAACCGCAC GTACCTGCTG CAGGACGACA ACGGCCAGAT CATCGAGACG
CATTCGGTGT CGGCGGGCCT CGATTATCCG GGCGTCGGTC CCGAGCACGC ATGGCTGAAG
GACAGCGGCC GCGCGCAGTA CGTGCCGATC ACCGACGCGG AAGCGTTGAA GGCGTTTCAC
GACTGCTGCC GGATCGAGGG GATCATTCCC GCGCTCGAGT CGAGCCACGC GATCGCGTAC
GGCGTGAAGC TCGCGCCGAC GTTGCCGAAG GACAAGCTCC TGCTCGTCAA CCTGTCGGGC
CGCGGCGACA AGGACATGCA CACGGTCGCC GAGCGATCGG GCATCGAGCT CTGA
|
|---|
| Protein sequence | MYNLPDDRGH FGPYGGVFVA ETLIHALDEL RAAYEKFQND PDFVAEFERE LKYFVGRPSP
IYHAQRWSEM LGGAQIYLKR EDLNHTGAHK INNVIGQALL AKRMGKKRVI AETGAGQHGV
ATATICARFG MECVVYMGSE DVRRQAANVY RMKLLGATVV PVESGSRTLK DALNEAMRDW
VTNIESTFYI IGTVAGPHPY PMMVRDFQRV IGDECKVQMP ELAGRQPDAV IACVGGGSNA
MGIFYPYIDD TSVQLIGVEA AGDGLDTGHH AASLIAGSPG VLHGNRTYLL QDDNGQIIET
HSVSAGLDYP GVGPEHAWLK DSGRAQYVPI TDAEALKAFH DCCRIEGIIP ALESSHAIAY
GVKLAPTLPK DKLLLVNLSG RGDKDMHTVA ERSGIEL
|
|---|
| |