Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_4401 |
Symbol | |
ID | 4094714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 1632231 |
End bp | 1633421 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638017688 |
Product | O-succinylhomoserine sulfhydrylase |
Protein accession | YP_624256 |
Protein GI | 107026745 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGACT CCCTCAACTT CGACACGCTT GCCGTGCGCG CGGGCACGCT GCGCAGCGAC TTCAACGAGC ATTCGGAAGC GCTGTTCCTC ACGTCGAGCT TCTGCTTCTC GAGCGCGGCC GACGCGGCCG AGCGCTTCGC GAATTCGGAA GACTATTTCA CCTATTCGCG CTTCACGAAT CCGACCGTCA CCATGTTCCA GGAGCGTCTC GCGGCGCTCG AGGGCGGCGA GGCGTGCATC GCGACGGCGT CGGGCATGGC CGCGATCATG TCGGTCGTGA TGTCCGCGCT GCAGGCAGGA GACCACCTCG TCAGCTCGCG CAGCCTGTTC GGCTCGACGC TCGGGATGTT CTCGCAGATC TTCAGCAAGT TCGGGATCAC GACGACCTTC GTCGACCCGA CCGACCTGAA CGCGTGGCAG GAAGCGGTGC GGCCGGAAAC GAAGATGTTC TTCCTCGAGA CGCCGTCGAA CCCGCTGACC GAGCTCGCCG ACATCGAGGC CATCGGCAAG ATCGCGAAGG CGGCGAACGC GCTGTTCGTC GTCGACAACT GTTTCTGCAG CCCGGTACTG CAGCAGCCAC TGAAGCTCGG CGCGGATGTC GTGATGCACT CCGCAACGAA ATTCCTCGAC GGGCAGGGCC GCGTGCTCGG CGGCGCACTG GTCGGCTCGA AGGAATTCAT CATGGGCAAG GTGTTCCCGT TCGTGCGCAG CGCGGGCCCG ACGCTGTCGG CGTTCAACGC GTGGGTGCTG CTGAAGGGGG TGGAGACGCT GTCGCTGCGC GTCGAGAAGC AGTCGGCGAA CGCGCTGGAG ATCGCGCGCT GGCTCGACTC GCATCCGGCG GTGGCGCGCG TGTTCTATCC GGGGCTCGAA TCGCATCCGC AGCATGAACT CGCGAAGCGT CAGCAGAAGG CGGGCGGTGC GATCGTGTCG TTCGAGCTGA AGGGCGACAC GCCCGAGCAG CAGCGCGCGA ACGCATGGCG CGTGATCGAC GGCACGAAGC TGGTGTCGAT CACCGGCAAC CTCGGCGACA CGCGTACGAC GATCACGCAT CCGGCCACCA CGACGCACGG CCGGATTACG CCGGAAGCGC GTGCGGCGGC GGGGATCACC GAAGGGTTGA TCCGCCTCGC GGTCGGCCTG GAGCATGCGG GCGACATTCG CAACGATCTG GCGCGTGGTC TGGACGGCTG A
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Protein sequence | MDDSLNFDTL AVRAGTLRSD FNEHSEALFL TSSFCFSSAA DAAERFANSE DYFTYSRFTN PTVTMFQERL AALEGGEACI ATASGMAAIM SVVMSALQAG DHLVSSRSLF GSTLGMFSQI FSKFGITTTF VDPTDLNAWQ EAVRPETKMF FLETPSNPLT ELADIEAIGK IAKAANALFV VDNCFCSPVL QQPLKLGADV VMHSATKFLD GQGRVLGGAL VGSKEFIMGK VFPFVRSAGP TLSAFNAWVL LKGVETLSLR VEKQSANALE IARWLDSHPA VARVFYPGLE SHPQHELAKR QQKAGGAIVS FELKGDTPEQ QRANAWRVID GTKLVSITGN LGDTRTTITH PATTTHGRIT PEARAAAGIT EGLIRLAVGL EHAGDIRNDL ARGLDG
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