Gene Bcen_4340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4340 
Symbol 
ID4094888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1562929 
End bp1563915 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content75% 
IMG OID638017631 
Productnitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_624199 
Protein GI107026688 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCACT CTTCCGCCCC CGCGCGCCGC CGCGCGCTGC AGCGCCTTGC CGCGCTCGCC 
GCCGCGCCGC TCGCCGGCGG CCTCGCACTG CCCGCCCGCG CGGCCGGCAC CGACCTGTCG
GGCGTCACGC TCGTCCTCGG CGACCAGGCC GGCGGCCTGC GGGCGCTGGC CGAAGCGGCG
CACGTGTTCG ACGGCGCGCC GTACCGGTTC CGCTGGGCCA ACTTCCAGGG CGCCGCGCCG
CTGTTCGAAG CGCAGCGCGC GGGCGCGATC GATCTCGCAC CGGCCGGCGA CCTGCCCGTG
CTGACGGCCG CGCTCGGCGA TCCGTCGTTG CGGATCGTCG CGACGCGCGT CGGCTCGCCG
GCGTCGCTCG GCATCGTCGT GCAGCCGGAC TCGCCGGTCC GCACGGTGGC CGACCTGAAA
GGACAAACCG TCGTCGTGTC GTCGGCGCGC GGCAGCATCT CGCAGTACCA GTTGTACGGC
GCGCTGCGCG AACACGGGCT CGCCCCGCGC GACGTCGACG TGCGCTTCGT GCTGCCGGTC
GACGCGTTCG CCGCATTCGA GGCGAAGCGG ATCGGCATCT GGGCCACGTT CGATCCGTAC
TACGGGCATG CGGTGCGACG CGGTGCGCGC ATCGTCCGCG ACGGCAGCGG CATCAATTCG
GGGCTTGCGT TCCTGACGTC GCCGGTCGAA ACGCTCGACG ATCGCGGCAA GCGCGCGGCG
CTCGCGGACG TGCTCGCGCG GCTCGCCCGC GCCGGTCAAT GGGCGCTCGC GCACCCGGCC
GACTACGCGA GCGTCTATGC GTCGCTCACG CGCCTGCCGC CCGACGCGGC CACCGACATC
GCGCGCCGGG CCGCGCTCGC GCAGCGCAGC CTCAGCGGCG CCGACATCGA CGTGCTGCAG
CGTGTCGCCG ATCGCGCGGC CGCGGATGCG ATCCTGCCGC GCCGCGTCGA CGTCGCGTCG
ATCGCCATCC GGAACGTGTC GGCCTGA
 
Protein sequence
MTHSSAPARR RALQRLAALA AAPLAGGLAL PARAAGTDLS GVTLVLGDQA GGLRALAEAA 
HVFDGAPYRF RWANFQGAAP LFEAQRAGAI DLAPAGDLPV LTAALGDPSL RIVATRVGSP
ASLGIVVQPD SPVRTVADLK GQTVVVSSAR GSISQYQLYG ALREHGLAPR DVDVRFVLPV
DAFAAFEAKR IGIWATFDPY YGHAVRRGAR IVRDGSGINS GLAFLTSPVE TLDDRGKRAA
LADVLARLAR AGQWALAHPA DYASVYASLT RLPPDAATDI ARRAALAQRS LSGADIDVLQ
RVADRAAADA ILPRRVDVAS IAIRNVSA