| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4142 |
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| Symbol | |
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| ID | 4094093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008061 |
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| Strand | - |
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| Start bp | 1325190 |
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| End bp | 1326968 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638017436 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_624004 |
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| Protein GI | 107026493 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00267636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCAG ACAAGAAGCC GCACGTCGAT GCGGTGATCG TCGGCTTCGG CTGGACCGGC
GCGATTCTCG CGAAGGAACT GACCGAAGCG GGATTGAACG TCGTCGCGCT CGAGCGCGGC
GAATATCGCG ACACCTATCC GGACGGCGCG TATCCGAACA CGATCGACGA GCTGACCTAC
AACATCCGCA AGAAGCTGTT CCTCGACCTG TCGAAGACGA CCGTGTCGAT CCGTCACGGC
CTGCAGGACA CCGCGCTGCC GTACCGGCAG CTCGCCGCGT TCCTGCCGGG CGAAGGCGTC
GGCGGCGCGG GGCTGCACTG GTCGGGCGTG CACTTCCGGA TCACGCCGGA AGAGCTGCGC
CTGCGCAGCC ACTATGAAGA GCGCTACGGC AAGAAGTTCA TCCCGGAAGG GATGACGATC
CAGGATACGG GCGTGACCTA CGACGAGCTC GAGCCGCATT TCGATTTCGC CGAGAAGGTG
TTCGGCACGT CGGGGCAGGC GTACAAGGTC GGCGGCAAGG TGGTCGGCGA CGGCAACGTG
TTCGAGGCGA ACCGCAGCGA CAACTTCCCG CTGCCCGCGC AGCTCAATAC CTATTCGGCG
CAGCGCTTCT TCGATGCCGC GCATTCGCTC GGCCTGCATC CGTACCGGCT GCCGTCGGCG
AACACGTCGG GCCCGTACAC GAACCCGTAC GGCGTGCAGA TGGGCCCGTG CAACTTCTGC
GGCTACTGCA GCGGCTACGC GTGCTACATG TATTCGAAGG CGTCGCCGAA CCTGAACATC
CTGCCCGCGC TGAAGCAGGC GCCGAACTTC GAGCTGCGCT CGAAGTGCCA CGTGCTGCGC
GTCGACCTCG ACGACACGAA GAAGCGCGCG ACCGGCGTCA CCTACGTCGA TCCGGCCGGA
CGTGAAGTGC ACCAGCCGGC CGATCTCGTG ATCGTGGCCG CGTTCCAGTA TCACAACGTG
CACCTGCTGC TGCTGTCGGG CATCGGCAAG CCGTACGATC CGATCTCGGG CGAAGGCGTG
GTCGGCCGCA ATTTCGCGTA CCAGAACCTG TCGACGATCA AGGCGTTCTT CGACAAGGAT
ACCTACACGA ACCCGTTCAT CGGCGCGGGC GGCAACGGCG TCGCGGTGGA CGACTTCAAC
GCGGACAACT TCGACCACGG CCCGCTCGGC TTCGTCGGCG GCTCGCCGCT GTGGGTGAAC
CAGGCCGGCG TGAAGCCGAT CAGCGGCATC GCCACGCCGC CCGGCACGCC GCAGTGGGGC
TCGGCGTGGA AGAAGGCCGT CAAGGACAAC TACGCGCACA CGATCTCGAT GGACGCGCAC
GGCACCAACA TGTCGTACCG CGACGTGTAT CTCGACCTCG ACCCGACCTA TCGCGATTCG
TACGGCCAGC CGCTGTTGCG GATGACGTTC GACTGGAAGG ACAACGACAT CAAGATGGCG
CAGTACGTGA CCGGGCAGAT GAAGAAGATC GCGGAAGCGA TGGGGCCGAA GGCGATCGGC
GTGTCGACGC GCGAATTCGG CAAGCACTTC GACTCGCGCC AGTACCAGAC GACCCACCTC
GTCGGCGGCG CGATCATGGG CACCGACCCG AAGACGAGCG TGCTGAACCG CTATCTGCAG
TGCTGGGACG TGCACAACGT GTTCGTGATG GGCGCGTCCG CGCTGCCGCA GGGCATCGGC
TACAACCCGA CCGGGATCAT CGCGGCGCTG GCCTACTGGT CGGCACGCGC GATCCGCGAG
CAATACCTGA AAAATCCCGC CCCGCTGGTG ACCGTATGA
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| Protein sequence | MAADKKPHVD AVIVGFGWTG AILAKELTEA GLNVVALERG EYRDTYPDGA YPNTIDELTY
NIRKKLFLDL SKTTVSIRHG LQDTALPYRQ LAAFLPGEGV GGAGLHWSGV HFRITPEELR
LRSHYEERYG KKFIPEGMTI QDTGVTYDEL EPHFDFAEKV FGTSGQAYKV GGKVVGDGNV
FEANRSDNFP LPAQLNTYSA QRFFDAAHSL GLHPYRLPSA NTSGPYTNPY GVQMGPCNFC
GYCSGYACYM YSKASPNLNI LPALKQAPNF ELRSKCHVLR VDLDDTKKRA TGVTYVDPAG
REVHQPADLV IVAAFQYHNV HLLLLSGIGK PYDPISGEGV VGRNFAYQNL STIKAFFDKD
TYTNPFIGAG GNGVAVDDFN ADNFDHGPLG FVGGSPLWVN QAGVKPISGI ATPPGTPQWG
SAWKKAVKDN YAHTISMDAH GTNMSYRDVY LDLDPTYRDS YGQPLLRMTF DWKDNDIKMA
QYVTGQMKKI AEAMGPKAIG VSTREFGKHF DSRQYQTTHL VGGAIMGTDP KTSVLNRYLQ
CWDVHNVFVM GASALPQGIG YNPTGIIAAL AYWSARAIRE QYLKNPAPLV TV
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