Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_4002 |
Symbol | |
ID | 4096265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 1171723 |
End bp | 1172370 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638017296 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_623864 |
Protein GI | 107026353 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAGG TGCTCATCGC CGACGACCAT ACGCTCGTAC GCGACGGTCT GCGGCACATC CTCCAGAACG CCACCGGATT CGAGGTGGCC GGCGAAGCCT TCGACGGCCC GTCGACGATC GCGCTGGTGC GGGCGACGCC CGCGCAGGTG CTCGTGCTCG ACCTGTCGAT GCCGGGCCGC AACGGCGTCG AGCTGATCAA GCAGATCAAG GACGAGAAGC CCGCGCTGCG CGTGCTCGTG CTGACGATGC ACGCGGAGCA GCAATACGCG GTGCGGGCGT TCCGCGCGGG CGCGTCGGGC TATCTGACGA AGGAAAGCGC GAGCGCGGAG CTGGTGGGCG CGGTCACGAA GGTGGCGTCG GGCGGCGTCT ACGTGAGCCT CGCGATGGCC GAGCAGTTCG CGCAGAGCCT GAACGAGCCG GCTGAAACGC TGCCGCACCA GCGGCTGTCC GATCGCGAAT TCGACGTGTT CCGGCGGATC GCCGCCGGCC AGACGCTGAC CGAGATCGCG AATGCGCTGT GCGTGAGCGC GAAGACGGTC AGCACCTACA AGACCCGGAT ACTGGAAAAG ATGCGGATGC CGCACGAAGC GGCGCTCGTG CGTTACGCGA TGCGGCACAA GCTGCTCGAC GAAACGGACG ACGTGTAA
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Protein sequence | MIKVLIADDH TLVRDGLRHI LQNATGFEVA GEAFDGPSTI ALVRATPAQV LVLDLSMPGR NGVELIKQIK DEKPALRVLV LTMHAEQQYA VRAFRAGASG YLTKESASAE LVGAVTKVAS GGVYVSLAMA EQFAQSLNEP AETLPHQRLS DREFDVFRRI AAGQTLTEIA NALCVSAKTV STYKTRILEK MRMPHEAALV RYAMRHKLLD ETDDV
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