Gene Bcen_3990 details

Gene Information

• Locus tag: Bcen_3990
• ID: 4094506
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008061
• Strand: -
• Start bp: 1156602
• End bp: 1158602
• Gene Length: 2001 bp
• Protein Length: 666 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 638017284
• Product: multi-sensor hybrid histidine kinase
• Protein accession: YP_623852
• Protein GI: 107026341
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACTC TGACCCGTGA GGTGTTCCGG CAAGGTGCAT GGGTCGTACT GGCCGTCGGG 
CTCGCGACCG CGCTGCAGGC GTGGGCGATT CGGGCTGTCG GCGAGCACGC GCCCTTTGCG 
CCGCTGCCTT TTTACGCAGG TGTGGCGGCC GCCGCATGGC TGACGTCGTT CGGCGGCGGC 
CTCGCCGCGA CCGCCGCCAG TGTCGGCGTG ATCGGCGCAT TGTGGTGGCG CGACGCGCCG 
CTGGCGACGC TGTTGGCGCA AGCCGGCGCG TTCGTCGCGA TCGGCTTCGT CGAATGCGTG 
CTGGTGGCGA CCGTGAAGCC GCTGCTCGCG AATGATCGAT TGCGGGACAT CGGCGACGAC 
GATAGCGATC CGTACCCGCC GCACCGCGAG CCGTCGTCCG TCGCGAGCCT ATCCGACGAC 
GGGCTGCTGC GCCGGGTGGT CGATGCGTCG CCCGATGCAA TCGTCGGGAC CGATGCCGCG 
CGCCGGATCA CCAGCTGGAA TCCGGCCGCC GCCAGCATCT TCGGCATCGA TACGGCCCAG 
GCGAACGGCC GCGATATCGT CACGATGATC GCGCCGCGCT GGTTGCGCCG GCACGCGGTG 
CCCGCGTCGT TCGCGGACCT GCGCGCGCCG GTCGGGCCGC TCGACGTGCT GTGCGTGCGC 
CCCGACGGCG GCCGTTTTCG CGCTACGTTC GCCGCGTCGC CGATCATCGA CGGGCAGGGC 
CACTGCGCGG GCCTGTCGCT GACGCTGCGC GAAGCGGGCG AACGCCGCCG CAACGAACGC 
CACCACCTTC GCTCGCTGCG CGGCGCCCGC GACGCGCGCG TGCAGGCCGA CGCGTCGAAC 
CGGCTGAAGG ACGAGCTGCT GGCGACGGTG TCGCACGAGC TGCGCACGCC GCTGAACGTG 
ATCTACGGCT GGGTCGAGGT ACTGCGCAAC GCCGACGGGC AGGGCTTCGC GCAGCAGGCG 
GTCGACGCGA TCGATCGCAG CGCGCGGTCG CTGTCGCACA TGGTCGCCGA CCTGCTCGAC 
GCCTCGTCCC TCGCGACCGG CCGGCTGCGT CTCGAACGCG TGCCGGTCGA CCTCGTGCGG 
ATCGTGCGCG ACGCCGCACG TGAACTCGAC GCGACCGCCC AGGCGAACGG GCTCGTGCTG 
TCGACGGAAT ACGCGATGCC GGCCTGCGTG ATTCCGGCGG ACGGCGAACG CCTGCGCCAG 
CTCCTGTCGA ACCTGCTGTC GAACGCGATC AAGTTCACGC CGCCGGGCGG CCGCATCAAC 
GTGTCGCTGA CGCGCGCCGG CGAGCGCGTG CGGCTGTCCG TCTCCGACAC CGGGCAAGGT 
ATCGCGCCGG AATACCTGCC GCACCTGTTC GACACGTTCA GCCGGCCGGA AGGCGCGTTC 
ACGTCGCCGA AGCGGGGCCT CGGGCTCGGC CTGTCGATCG TGCGCAACAT CGCGCAGCTG 
CACGGCGGCG AGGTAATTGC GACGAGTGCG GGCGCCGGGC GCGGCATGAC CGTCACGGTG 
ACGCTGCCGG CCGGCTGGGA CGCCGACGAT CCGACGGAGC AGCCGTCGCG GACGAAGGGC 
GCGTCCGACA CGGTCGCGCT CGACGGCCAG CGCGTGCTGG TGGTCGACGA CGACGCAACG 
TCCCGGACCA GCCTTGCGGC AGCGCTCGAA ACGATGGGCG CACAGGTATC GACCGCGCGG 
TCGGGGCACG ATGCGCTCGA AGCGGTGGAG CGGCAGCCGC CGAGCGTCGT GCTGTCGGAT 
CTCGCGATGC CGGACGGCGA CGGTTACTGG CTGCTGGACC GGATCCGGCG CTTGCCGAAC 
GGCGGCGGAC ATCTGCCGGT CGTCGCGGTG ACCGCGCACG CCGGCAAGGC CGACCGGCGC 
CGGGTGATGG CCGCGGGGTT CGATGCGTAT CTGTGCAAGC CGGTCGACAT GCCGACGCTC 
GCGAGCGTGA TCGTCGACGT CGTACCGGAT GACGCGGGCG ACACGGGAGA CACTGGAGAC 
GGGAAGCCGC GCCAGCGGTA G 

 

Protein sequence

MTTLTREVFR QGAWVVLAVG LATALQAWAI RAVGEHAPFA PLPFYAGVAA AAWLTSFGGG 
LAATAASVGV IGALWWRDAP LATLLAQAGA FVAIGFVECV LVATVKPLLA NDRLRDIGDD 
DSDPYPPHRE PSSVASLSDD GLLRRVVDAS PDAIVGTDAA RRITSWNPAA ASIFGIDTAQ 
ANGRDIVTMI APRWLRRHAV PASFADLRAP VGPLDVLCVR PDGGRFRATF AASPIIDGQG 
HCAGLSLTLR EAGERRRNER HHLRSLRGAR DARVQADASN RLKDELLATV SHELRTPLNV 
IYGWVEVLRN ADGQGFAQQA VDAIDRSARS LSHMVADLLD ASSLATGRLR LERVPVDLVR 
IVRDAARELD ATAQANGLVL STEYAMPACV IPADGERLRQ LLSNLLSNAI KFTPPGGRIN 
VSLTRAGERV RLSVSDTGQG IAPEYLPHLF DTFSRPEGAF TSPKRGLGLG LSIVRNIAQL 
HGGEVIATSA GAGRGMTVTV TLPAGWDADD PTEQPSRTKG ASDTVALDGQ RVLVVDDDAT 
SRTSLAAALE TMGAQVSTAR SGHDALEAVE RQPPSVVLSD LAMPDGDGYW LLDRIRRLPN 
GGGHLPVVAV TAHAGKADRR RVMAAGFDAY LCKPVDMPTL ASVIVDVVPD DAGDTGDTGD 
GKPRQR