Gene Bcen_3972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3972 
Symbol 
ID4094488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand- 
Start bp1140706 
End bp1141833 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content68% 
IMG OID638017266 
Product4-hydroxyphenylpyruvate dioxygenase 
Protein accessionYP_623834 
Protein GI107026323 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR01263] 4-hydroxyphenylpyruvate dioxygenase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGGCA ATTCCCACCC CTTGTCCAGC GATACGCCGC CCGTCGCCGA TCCGGCCGCC 
AATCCGCTCG GGATGGCCGG CCTCGAATTC GTCGAATTCG CGGCGCCCGT GCCGGACGCG 
CTCGCGCAAC GCTTCGAGCA GCTTGGGTTC AAGGCGATCG CGCGGCACGT CAGCAAGAAC 
GTCACGTTGT ACCGGCAGGG GCAGATGCAT TTCCTGATCA ACGCCGAGCC CGATTCGTTC 
GCCGCGCGCT ATGCGGAGGA GTACGGGATG GGCGTCTGCG CGATCGGGCT GCGGGTGGCG 
AATGCCCGGC GCGCGTTCGA ACGCGCGATC CAGCTCGGAG CATGGGCGTT CGAAGGCGAA 
AAGGTCGGCG TCGGCGAGCT GAAGATCCCT GCCATCCAGG GCATCGGCGA TTCGCACCTG 
TATTTCGTCG ACCGCTGGCG CGGGCGGGAC GGCCAGCGCG GCGGCGTCGG CGACATCTCC 
ATCTTCGACA TCGATTTCCG GCCGATCGAC ATCGCGACCG CGCATACCGA TCTCGACTGC 
GCGGGCGTCG GCCTGCAGCA GGTCGACCAC TTCACGCAAA CGGTCGGCGC GGGACGGATG 
CAGGAGTGGC TGGATTTCTA CCACGACCTG CTGCATTTTC GCGAGATCCA CCAGATCGAC 
GCGCACTGGC ATGTGTCGGA GGAATCGCGC GTAATGGTGT CGCCGTGCGG CGCGGTCCGG 
ATTCCGGTCT ACGAGGAAGG CACGCGGCGT ACCGACCTGA TGCATGCGTA CCTGCCCGAC 
CATCCGGGCG AGGGCGTGCA GCACGTCGCG CTGGCCACCG ACGACATCCT GTCGTGCGTC 
GATGCCCTGC GCGCGAACGG CGTCGAGTTC ATCGAGCCGC CTGCACGCTA TTACGACGAC 
GTCGATGCGC GGCTGCCCGC GCATGGTGTC GATCTCGACG CGCTGCGCCG CCGCGCGGTG 
CTGGTCGACG GCGAGATCGG CAGCGACGGC GTGCCGAGGC TGTTCTTCCA GACCTTCGTC 
AAACGCCGCC CCGGCGAGAT TTTCTTCGAG ATCGTGCAGC GCAAGGGGCA CCACGGGTTC 
GGCGAGGGCA ACCTCGCGGC ACTCGCCCGC GCGCGCGACG CCGGGTGA
 
Protein sequence
MPGNSHPLSS DTPPVADPAA NPLGMAGLEF VEFAAPVPDA LAQRFEQLGF KAIARHVSKN 
VTLYRQGQMH FLINAEPDSF AARYAEEYGM GVCAIGLRVA NARRAFERAI QLGAWAFEGE 
KVGVGELKIP AIQGIGDSHL YFVDRWRGRD GQRGGVGDIS IFDIDFRPID IATAHTDLDC 
AGVGLQQVDH FTQTVGAGRM QEWLDFYHDL LHFREIHQID AHWHVSEESR VMVSPCGAVR 
IPVYEEGTRR TDLMHAYLPD HPGEGVQHVA LATDDILSCV DALRANGVEF IEPPARYYDD 
VDARLPAHGV DLDALRRRAV LVDGEIGSDG VPRLFFQTFV KRRPGEIFFE IVQRKGHHGF 
GEGNLAALAR ARDAG