Gene Bcen_3958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3958 
Symbol 
ID4095855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1125821 
End bp1127266 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content69% 
IMG OID638017252 
Productsuccinate-semialdehyde dehydrogenase (NAD(P)+) 
Protein accessionYP_623820 
Protein GI107026309 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAACG TGACTTATAC GGATACGCAA CTGCTGATCG ACGGCGAGTG GGTCGACGCC 
GCGAGCGGCA AGACGATCGA CGTCGTGAAC CCGGCGACCG GCAAGCCGAT CGGCAAGGTG
GCCCACGCGG GCATCGCCGA TCTCGACCGG GCGCTCGCCG CCGTGCAACG CGGCTTCGAG
GCATGGCGCA AGGTGCCCGC GCACGAACGC GCGGCGACGA TGCGCAAGGC GGCCGCGCTG
GTGCGCGAAC GCGCCGACAC GATCGCGCAG CTGATGACGC AGGAGCAGGG CAAGCCGCTT
ACCGAAGCGC GCGTCGAAGT GCTGTCGGCG GCCGACATCA TCGAATGGTT CGCGGACGAA
GGCCGCCGCG TGTACGGCCG GATCGTCCCG CCGCGCAACT TCAATGCGCA ACAGACGGTC
GTCAAGGAGC CGGTCGGCCC GGTCGCGGCG TTCACGCCGT GGAACTTCCC GGTCAACCAG
GTCGTGCGCA AGCTGAGCGC CGCGCTCGCG ACCGGCTGTT CGTTCCTCGT GAAGGCGCCG
GAAGAAACGC CCGCATCGCC GGCCGCGCTG CTGCGCGCGT TCGTCGACGC AGGCGTGCCG
GCCGGCGTGA TCGGCCTCGT GTTCGGCGAT CCGGCTGAAA TCTCGTCGTA CCTGATTCCG
CACCCGGTGA TCCGCAAGGT GACGTTCACC GGTTCGACGC CGGTCGGCAA GCAACTGGCC
GCGCTCGCGG GCCAGCACAT GAAGCGCGCG ACGATGGAAC TGGGCGGCCA CGCGCCGGTG
ATCGTCGCCG AGGACGCGGA CGTCGCGCTC GCGGTGAAGG CCGCCGGCGG GGCGAAATTC
CGCAACGCGG GCCAGGTCTG CATTTCGCCG ACGCGCTTTC TCGTGCACAA CAGCATCCGC
GACGAATTCA CCCGCGCGCT GGTCAAGCAT GCCGAAGGGC TGAAGGTCGG CAATGGCCTC
GAGGAAGGCA CGACGCTCGG CGCGCTCGCG AACCCGCGGC GCCTGACCGC GATGGCGTCG
GTCGTCGACA ACGCGCGCAA GGTCGGCGCG AGCATCGAGA CCGGCGGCGA GCGGATCGGC
GCGGAAGGCA ACTTCTTCGC GCCGACCGTG ATCGCGAACG TGCCGCTCGA AGCGGACGTG
TTCAACAACG AGCCGTTCGG CCCGGTCGCG GCGATTCGCG GCTTCGACAA GCTCGAGGAT
GCGATCGCCG AGGCGAACCG TCTGCCGTTC GGTCTGGCCG GCTACGCGTT CACGCGTTCG
TTCGCGAACG TGCATCTGCT GACGCAGCGC CTCGAAGTCG GGATGCTGTG GATCAACCAG
CCGGCGACGC CGTGGCCGGA AATGCCGTTC GGCGGCGTGA AGGATTCGGG CTACGGGTCG
GAAGGCGGCC CGGAAGCACT GGAGCCGTAT CTCGTCACGA AGTCGGTGAC GGTGATGGCC
GTCTGA
 
Protein sequence
MANVTYTDTQ LLIDGEWVDA ASGKTIDVVN PATGKPIGKV AHAGIADLDR ALAAVQRGFE 
AWRKVPAHER AATMRKAAAL VRERADTIAQ LMTQEQGKPL TEARVEVLSA ADIIEWFADE
GRRVYGRIVP PRNFNAQQTV VKEPVGPVAA FTPWNFPVNQ VVRKLSAALA TGCSFLVKAP
EETPASPAAL LRAFVDAGVP AGVIGLVFGD PAEISSYLIP HPVIRKVTFT GSTPVGKQLA
ALAGQHMKRA TMELGGHAPV IVAEDADVAL AVKAAGGAKF RNAGQVCISP TRFLVHNSIR
DEFTRALVKH AEGLKVGNGL EEGTTLGALA NPRRLTAMAS VVDNARKVGA SIETGGERIG
AEGNFFAPTV IANVPLEADV FNNEPFGPVA AIRGFDKLED AIAEANRLPF GLAGYAFTRS
FANVHLLTQR LEVGMLWINQ PATPWPEMPF GGVKDSGYGS EGGPEALEPY LVTKSVTVMA
V