Gene Bcen_3932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3932 
Symbol 
ID4096234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand+ 
Start bp1097379 
End bp1098428 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content69% 
IMG OID638017226 
ProductABC transporter, substrate-binding protein, aliphatic sulphonates 
Protein accessionYP_623794 
Protein GI107026283 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0335865 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTGGA TCGACGTATC TTCACCGGTT CCATCCGTTG CGCCGGCGGT TTCGCACGGC 
GGACAAACCT TCCGGGAGAT CATGTTGCTG AGCCGAATCG TCACGGCGCT CTTGCTGGCG 
CTCGCCGCGC AGCCGGGCAT CGCCAAAGAC ACCGTCACGC TGCGTGTCGG TGAACAGAAC 
TACTTCAACA TCCAGGCGTC GATGGAGGCG TCCGGCGCGC TGAAGGACCT GCCTTACACG 
ATCGAGTGGA AGCACTTCCA GGCCGCCGCG CCGGTGGCCG AAAGCCTGAA CGGCAACGCG 
ATCGACCTCG GCTTCCTCGG CGATTCCGCG CTGCTCACGC TGGCCGCGCG CGGCGCGCCG 
GTCAAGGTCG TCGCGGTGTC GCGGCAGAGC CTCGACGGCG TCGCGATCCT CGTGCCGAAG 
AACTCGCCGG TGCGCACCGT GGCCGACCTG CAGGGCAAGA CCATCGCGGT ATGGCGCGGC 
GCGTGGAGCC AGCAGCTCGT GCTGCGTGCG CTCGAACACG CGGGGCTGCG CGCCGATTCG 
GTGAAGTACG CGTACCTGAT GCCGATCGAC GCGACCAACG CGCTCGCGAA CGGCTCGGTC 
GACGCGGTGT CGCTGTGGGA GCCGTTCGTC AGCACGCTCG CATTGCGGCA GGGCGCGCGG 
CCCGTGACGA CCGCGCAGGG GCTGATGCCG GCGCTGAGCT TCGTCGCCGC GAACGAGCAG 
GCCGCAGCGG GCAAGCGCGC CGAGATCACC GATTTCCTGC GGCGTGTGGT GGTCGCGCGC 
CAGTGGGTCG ACAGCCATCC GCGCGAGTAC GCGGACCTGT GGGCGAAACG CGCGAATCTC 
GAACCCGACG TCGCGTATCG CTGGCTCAAC AATGCCCGGC AGCGCGTCGG CCCGGTCGAC 
GAGACGGCCG CGAAGGATGC ACAGAATACG GCCGACTTCC TGCACAAGTC CGGCGTGATT 
CCGGCCGCGT ACGACACGTC GAAGCTGCTC GACCGCTCGT ATGCGGGCGC GTTCGCGGCG 
CCTGCGCAGA AGACCGCCGC CGCGCAGTGA
 
Protein sequence
MKWIDVSSPV PSVAPAVSHG GQTFREIMLL SRIVTALLLA LAAQPGIAKD TVTLRVGEQN 
YFNIQASMEA SGALKDLPYT IEWKHFQAAA PVAESLNGNA IDLGFLGDSA LLTLAARGAP 
VKVVAVSRQS LDGVAILVPK NSPVRTVADL QGKTIAVWRG AWSQQLVLRA LEHAGLRADS 
VKYAYLMPID ATNALANGSV DAVSLWEPFV STLALRQGAR PVTTAQGLMP ALSFVAANEQ 
AAAGKRAEIT DFLRRVVVAR QWVDSHPREY ADLWAKRANL EPDVAYRWLN NARQRVGPVD 
ETAAKDAQNT ADFLHKSGVI PAAYDTSKLL DRSYAGAFAA PAQKTAAAQ