| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3788 |
|---|
| Symbol | |
|---|
| ID | 4094921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 930386 |
|---|
| End bp | 931306 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638017085 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_623653 |
|---|
| Protein GI | 107026142 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3781] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.476035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGTTC GTCCGCGCGA ACACTGGCTG CGGATGCTGC TCGTCTGGAA CGGCTCGGTG
CTGCCGACCA TCCTGCCGCA GCTCGTGCTG ACGCTCGCGA TCAGTCTCGT CGCCGTGTGG
GGCGGCGGCC GCGTGCTCGG CGAGAAGGTG CCGCTGAATC CGACGCCGTT CACGCTGATC
GGCCTGACGC TCGCGATCTT CGCCGGGTTT CGCAACAACG CCAGCTACGA ACGCTATCGC
GAGGGCCGGC AGCTGTGGGG CGGCGTGCTG ACCGCCACGC GCACGCTGGT GTCGCAGGCG
CTCTGCTACG GCGCGGTGGA CCGTGACGAC GCATCGCGCC GCGCGTTCGT GCGCACGGTC
GTCGCGTTCG TCTACACGCT CAAGCATCAA CTGCGCGGCA GCGACCCGGC CGCGGACCTG
CGTGGGCTGC TCGATGGCGC CACCTATGCG CGCGTCGCCG CTTCCCGGTT TCGCCCGGTC
GTCATCGTGC ACGCGCTGCG CGAAGCGTTC GCCGCGCGCG CCGATGCGGG CCAGCTCGCC
GACACGCGGC TGTGGATGCT CGATGCGCGC CTCGACGATC TCGTCGCGAT GGTGAGCGGC
TGCGAGCGCA TCGCGTCGAC GCCGATCCCG TTTTCATACG ACGTGCTGCT GCACCGGACC
ATCTACGCGT ATTGCGTGTT GCTGCCGTTC GGCCTCGTCG ATTCGATCGG CGCGGCGACA
CCTTTCGTAA CAGTTTTCGT CGCCTATACG CTGATCGCGC TCGACGCCAT CGCCCACGCG
ATCGCCGAGC CGTTCGGCGA CGGGCCGAAC CATCTCGCGC TCGACGCGAT GACGCGGCAG
ATCGAGCGCA CGCTGCTCGA ACTGAACCGC GAGCCGCTGC CGGCCGAGGT GATGCCCGGT
CCGTCGTACC GCCTCACCTG A
|
|---|
| Protein sequence | MIVRPREHWL RMLLVWNGSV LPTILPQLVL TLAISLVAVW GGGRVLGEKV PLNPTPFTLI
GLTLAIFAGF RNNASYERYR EGRQLWGGVL TATRTLVSQA LCYGAVDRDD ASRRAFVRTV
VAFVYTLKHQ LRGSDPAADL RGLLDGATYA RVAASRFRPV VIVHALREAF AARADAGQLA
DTRLWMLDAR LDDLVAMVSG CERIASTPIP FSYDVLLHRT IYAYCVLLPF GLVDSIGAAT
PFVTVFVAYT LIALDAIAHA IAEPFGDGPN HLALDAMTRQ IERTLLELNR EPLPAEVMPG
PSYRLT
|
|---|
| |