Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3779 |
Symbol | |
ID | 4094912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 917628 |
End bp | 918515 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638017076 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_623644 |
Protein GI | 107026133 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCTGCG CCTTCGCCCA TACCGTCGAA TCCCGCTTTG CCGAGCTGAC GCCGACCGCG AAGCGCATCG CGAGCTACAT GCTCGCGAAC CTCGATCGGC TCGGCCTCGA AACCGCCGAC CAGATCGCGC AGCAGACCGG CACCAGCGGC ATTTCGGTCG GGCGTTTCCT GCGCAGCGTC GGTTACCGGA ATCTCGACGA CCTGAAACGC GAACTGCGCG GCGGCGGCGA CCGCCCGTGG ATGATCACCG ACCGCCTCGA CGAGTACCGC CGCGCCACCG CCACGCCAAC GACCGTCGGC GAGCGCGACG GCCATCGCGA TGGCGGCACG CTCGCGTCGT CGCTCGAGCG CGAACTCGAC GCGATCCGCC ACGTGTACCG GCTCGCCGAA GAACCGGTGT TCGCGCAGGT CGCGGACCGG ATCGCGCATG CCGATGCCGT CTTCATCCTC GGCATCCAGT CGACCCGCGG CATCAGCAAC GCATTCAGCA GCTACCTCGA ATACCTGCGC CCGCGCGTGT TCTATTCCGA CGGCCAGTCG GGCTCATACG TCGATTCGCT GAATTCGGAG TTCGAACGGC CGTACTGCAT CGTCACCGAC ACGCGTGCCT ATTCGCGCAG CGCGCGCCGC TATTGCCAGG CGGCCGCCGA ACGCGGCCAG CCGTTCGCAC TGGTCACCGA TCTGTATTGC CCGTGGGCGC GCGAGTGGCC GGCCGACCTG CTGCAGGTGA AGACCGATGT CGGCCAGTTC TGGGATTCGC TCGCGCCGCT CACCTGCCTG TTCAACCTGC TGATCACCGC CGTGGTCGAC CGCCTCGGTC CCGCGATCGA CCGGCGCGTC GCGCGCAACC GCGAACTGCA GCGCACGTTC GACCAATTCG AATCCTGA
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Protein sequence | MTCAFAHTVE SRFAELTPTA KRIASYMLAN LDRLGLETAD QIAQQTGTSG ISVGRFLRSV GYRNLDDLKR ELRGGGDRPW MITDRLDEYR RATATPTTVG ERDGHRDGGT LASSLERELD AIRHVYRLAE EPVFAQVADR IAHADAVFIL GIQSTRGISN AFSSYLEYLR PRVFYSDGQS GSYVDSLNSE FERPYCIVTD TRAYSRSARR YCQAAAERGQ PFALVTDLYC PWAREWPADL LQVKTDVGQF WDSLAPLTCL FNLLITAVVD RLGPAIDRRV ARNRELQRTF DQFES
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