Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3748 |
Symbol | |
ID | 4095095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 882000 |
End bp | 883229 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638017045 |
Product | porin |
Protein accession | YP_623613 |
Protein GI | 107026102 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.130347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCCCC GGGCCGGCGA TGCGAGCAGA CCGATCCACT CCAACGAAAC CATCATGAAG AAATATCTGG CAATTCCGGC GGCGGTCGCC TGCCTGCTGG CGAGCGCGGC GCATGCGCAG AGCAGCGTGA CGCTGTACGG CACGATCGAC GCGGGCCTGG ACTACATCAG CAACCAGAAA TCGGCCGCGG GCGCGGGGCC CGTCTACGGT GTCCAGAGCG GCAACGTCAG CACGTCGCGC TGGGGGCTGC GCGGCAACGA GGATCTCGGC GGCGGGCTGG CTGCCGTGTT CACCCTCGAG AACGGCTTCA ACGTCGCGAA CGGCAAGCTT GGCAACGGTG GCGACGAATT CGGCCGCCAG GCGTGGGTGG GCCTCGCGAG CCGCCAGTGG GGTACGGTGA CGCTCGGCCG CCAGTACGAT TTCCTGGTCG ACTTCGTCGC GCCGCTGTCG GCGACGGGGT CGGGATTCGG CGGCAACCTC GTCGATCATC CGTACGACAA CGACAACCTC GCCAACGACA CGCGGATGAA CAACGCGGTG AAGTTCCGCA GTGCGAACTA CGGCGGCTTC ACGTTCGGCG GTGCGTACGG CTTCAGCAAT CAAGGCGGCG GATTCAGCAA CGACAACGCG TACAGCGTCG GTGCGCAGTA CGTGAACGGC CCGGTCGACC TCGCCGTCGC GTACCTGCAG TCGAACCAGC CGGGCGGCGT CGACGCGCCG CAGAACACCG GCGGGTCGCT GAGCAGCGCC GATGGCGATG CGATGCTGAC CGGCGGCCGC TGGCGCACGT TCGGCGCCGG CGCGCACTAT GCGTTCGACC ATGCCGCGAT CGGCTTCGTC TACACCAGAA CGATCCTGAA CGACCCGCGC GAGCTGTCGC AGGGCGGCGC GTACGGCCGC GTGAACGGCC AGTTGCTGAC CTTCAGCAAC TACGAACTGA ACGGGCGCTA CTTCCTCACG CCGGCCCTCT CGCTGGGCGG CGCCTATACG TTCACGCAGG GGCGCTTCGA CGATGCGGGC CGCGGCATCG CGCCGAAGTG GAACCAGTTC ATGCTGCAGG CCGACTATGC GCTGTCGCGT CGCACCGACC TCTATCTGGA AGGCGTGTAT CAGCGCGTGA CGGGTGCGGA CGGCGTTGCG GTGCTCGGCC ACGCGGGGAT CTTCAACCTG GCCGCGTCAG GCAACGATCG TCAGGCCGTC GTCGCGGCCG GTATCCGTCA CAAGTTCTGA
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Protein sequence | MLPRAGDASR PIHSNETIMK KYLAIPAAVA CLLASAAHAQ SSVTLYGTID AGLDYISNQK SAAGAGPVYG VQSGNVSTSR WGLRGNEDLG GGLAAVFTLE NGFNVANGKL GNGGDEFGRQ AWVGLASRQW GTVTLGRQYD FLVDFVAPLS ATGSGFGGNL VDHPYDNDNL ANDTRMNNAV KFRSANYGGF TFGGAYGFSN QGGGFSNDNA YSVGAQYVNG PVDLAVAYLQ SNQPGGVDAP QNTGGSLSSA DGDAMLTGGR WRTFGAGAHY AFDHAAIGFV YTRTILNDPR ELSQGGAYGR VNGQLLTFSN YELNGRYFLT PALSLGGAYT FTQGRFDDAG RGIAPKWNQF MLQADYALSR RTDLYLEGVY QRVTGADGVA VLGHAGIFNL AASGNDRQAV VAAGIRHKF
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